Bipolaris zeicola: COCCADRAFT_102200
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Entry
COCCADRAFT_102200 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
bze
Bipolaris zeicola
Pathway
bze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCCADRAFT_102200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_102200
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
COCCADRAFT_102200
Prokaryotic type
Archaeal type
TFB
COCCADRAFT_102200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
PPR_long
Motif
Other DBs
NCBI-GeneID:
19142510
NCBI-ProteinID:
XP_007714622
JGI:
102200
UniProt:
W6XZC0
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MSYAPDGRLLSPGEVYEAAPVQVKDDEWQEDLNVALICPDCKENPPNLVEEFSAGDTICG
SCGRVLADRIIDTRSEWRTFSNDGKRMLTLYLALDQGNDDPSRIGDAANPLLHGSQLQTE
IGFGDGGMRVRDLSRAHNKSNHDKVNKALQAAYGQITALCDSQNISRPTAETAKMLYKMT
DDAKLFKGKSQDAIIAGCIFIACRKHDQQRSFREIFKMTNVSKKEVGRTFKVLEAFIQKS
QNSGPSVAGNGAVIDTVNLLNQKGGTTATSAASLMPRACAKLALGTQVQMVAEECADQVA
HYGVAAGRSPLSIAGACLYLVSHLMGQPKSPKEIGLAVEVSDGTIRTAYKLMHMEQDKII
KDEWIAKGGDRSRIPAA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgcacccgacggccgcctcctgtcgcctggtgaggtatacgaagccgcgccc
gtgcaggtaaaggacgacgagtggcaagaggacctgaacgttgctttgatctgccccgac
tgcaaagagaaccctcccaatctggtagaggagttcagtgctggcgataccatttgcggc
tcctgtggtcgcgtcctcgccgacagaatcatcgacacccgctcggaatggagaaccttc
tccaacgacggcaagcgcatgctaacattgtatcttgctttagaccagggcaacgatgat
ccatcacgtatcggtgacgctgccaacccccttctgcacggctcccagcttcagactgag
atcggtttcggtgacggtggtatgagggttcgcgatctttccagggctcacaacaagagc
aaccatgacaaggtcaacaaggcgctgcaggctgcctacggtcagatcacagcgctctgt
gacagtcaaaacattagcagaccgacggccgaaacggccaagatgctctacaagatgacg
gacgatgcgaagctgttcaagggcaaatcacaggacgctatcattgccggctgcatcttc
atcgcatgccgaaagcacgaccagcagcgtagtttccgtgaaatcttcaaaatgaccaac
gtgtccaagaaggaagtcggccgtaccttcaaggtcctcgaagcctttatccagaaatca
cagaacagcggtccatcagtcgccggaaacggagctgtcatcgacacagtcaacctcctc
aaccaaaagggcggcaccactgccaccagcgccgccagcctcatgcctcgtgcctgtgcc
aagctagctctaggcacccaggtccagatggtggccgaagagtgtgccgaccaggtcgct
cactacggtgttgcagccggtcgatcccctctgtctatcgctggtgcctgtctctacctg
gtctcacatctcatgggccagcccaaatcaccaaaggaaatcggtctcgccgtcgaagtc
agcgacggcaccattcgtactgcgtacaaactcatgcatatggagcaggataagattatc
aaagatgaatggattgcaaagggtggtgaccggtctaggatccctgctgcttag
DBGET
integrated database retrieval system