Bipolaris zeicola: COCCADRAFT_102250
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Entry
COCCADRAFT_102250 CDS
T03110
Name
(RefSeq) polysaccharide lyase family 3 protein
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
bze
Bipolaris zeicola
Pathway
bze00040
Pentose and glucuronate interconversions
bze01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCCADRAFT_102250
Enzymes [BR:
bze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
COCCADRAFT_102250
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
19142520
NCBI-ProteinID:
XP_007714618
JGI:
102250
UniProt:
W6Y0J0
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MKFSTSVILPLLPALSTAAVIPRQNGDGPQGSTDSTQGDLGARPPPRFPFPVTKFPVPTE
TVVLKEAMYIAAGQVFDGQMKRYERVEGSCSEQAEGTDADAVFNLLPGATIRNVIIGKHQ
SEGIHALGDAWVENVWWEDVCEDALTSKGLNTQLRVIGGGARNATDKIFQDNSLGGKVNI
TGFYAENFGTFYQSCGNCLNQAKRNVTIQNVIAVKGTRMGIINPNYGDEYRIKDSQVTDV
DRYVDKEIGNNVQTVPYTVGTGPDEKYALYNLTRDHVTEFEGEILNQYVPEEPYEWLGTY
WKEGTGTD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctctacctcggtcattctcccccttctacctgcactctccacagcagcagtg
ataccgcgccagaatggcgatggaccacagggtagcacagactcgacacagggtgatctt
ggagcacgacctccccccagattcccttttccggtcacaaagttccccgttccgactgag
actgttgtgcttaaagaggccatgtacattgctgctggccaggtcttcgatggacaaatg
aagcgatacgagcgtgttgagggtagctgcagtgagcaggctgagggaaccgacgcggat
gctgtcttcaacttacttcctggtgctacaatccggaacgtgattattggtaaacaccag
agtgaaggtatccatgctctcggagatgcctgggtggagaatgtgtggtgggaggatgta
tgtgaggacgcacttacatctaagggcctaaacacccaactccgcgtcatcggcggaggc
gcacgcaacgccaccgacaagatcttccaggacaactcgctaggaggcaaagtcaacatc
acaggcttctacgccgaaaactttggtactttctatcaatcctgcggaaactgcctcaac
caggcgaagcgcaacgtcaccatccaaaacgtcattgccgtaaaaggcacaagaatgggt
ataatcaaccccaactacggcgacgaataccgcatcaaagattcccaagtcacagatgtc
gaccggtacgtcgacaaggagattggcaacaatgtccaaacagttccttatacggttgga
actgggcccgatgagaaatatgcgctgtataatttgacgcgcgaccatgttacggagttt
gagggggagattttgaatcagtatgtgccggaggagccgtatgagtggcttggtacttac
tggaaggagggtactggtacggactga
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