KEGG   Bipolaris zeicola: COCCADRAFT_102405
Entry
COCCADRAFT_102405 CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
bze  Bipolaris zeicola
Pathway
bze03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    COCCADRAFT_102405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bze03019]
    COCCADRAFT_102405
   03036 Chromosome and associated proteins [BR:bze03036]
    COCCADRAFT_102405
Messenger RNA biogenesis [BR:bze03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     COCCADRAFT_102405
Chromosome and associated proteins [BR:bze03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     COCCADRAFT_102405
    COMPASS/SET1 complex (yeast)
     COCCADRAFT_102405
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 19142554
NCBI-ProteinID: XP_007714692
JGI: 102405
UniProt: W6Y0A6
LinkDB
Position
Unknown
AA seq 372 aa
MAGLATPGGGPPPPPAGPPTQKVSDVITSFRPQRRFKSGGHGTSITSLDFDDSGELAIVA
RDDDTLQIYNCKEGKHAKELKSQKYGVHLARFSHHAQSIIYASTKVDDTIRFLSTHDNSY
IRYFKGHTDTVTSIALCPSKDDFISCSRDNTVRLWNLQSPNYVGLLNLHAPYLAAYDPSA
TVIAIASPPTQSILLYDMRNYDKPPFATFDLLEYEQRFMGGQKVDWTKMEFSNDGKSLVV
ATNGSGHFVLDAFSGDISHFCYRKAGSSGRLPPASSVTNVSGAARNGDTPANGQGDVCLT
PDGQFLIGGSGEDGLLVWDISKPPAPNNILEPMEKLPGQGKGAIVGYNPRTNLLASADRD
LYLWQPDADLMI
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggctgggctagcaacgcccggcggaggacctcctccaccgcctgcaggcccgccgaca
caaaaagtgagcgacgtcataacgagcttccggcctcaaagacgcttcaaatccggcggc
cacggcacgtccatcacctcgctcgactttgacgactcgggcgaactcgccattgtagcc
cgcgacgatgacacactgcaaatctacaactgtaaagaaggcaagcatgcaaaagagctc
aagagccaaaagtacggcgtccaccttgcgcgcttcagtcaccacgcccagagcatcatc
tacgccagcacaaaggtcgacgataccatccgcttcctctccacccacgataactcgtat
atacgctatttcaagggccacaccgacaccgttacgtcgattgccctgtgcccgtccaaa
gacgacttcatcagctgttcgcgggacaatacggtgcgcttgtggaacctacagtcgcca
aattacgttggcctgctcaatctacatgcgccctacctcgctgcctacgacccgtcggcg
accgtcattgccatcgcttcgccgccgacgcaatctatcctcctctatgacatgcgcaac
tacgacaagccgccattcgccacgtttgacctgctggagtacgagcagcgcttcatggga
ggacaaaaggtggactggacaaagatggagtttagcaatgacggcaagagtctagtcgta
gccaccaatggtagcggccactttgtcctcgatgccttctccggcgatatctcgcacttt
tgttaccgcaaagctggatcctcagggcgcctaccgcccgcgtcgtccgtcaccaatgtc
agtggcgctgcacgtaacggggacacgcctgcaaacggccaaggcgatgtgtgtctcact
ccagacggtcagttcttgattggaggcagtggagaagacggcctgctggtatgggatata
tccaagcctcctgcgcccaataacatcttagaaccaatggagaagcttccgggtcagggc
aagggtgctattgtcgggtataaccctaggacgaatctgctcgcgagtgcagatagagat
ttgtatctctggcagccggatgccgatttgatgatttga

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