Bipolaris zeicola: COCCADRAFT_102438
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Entry
COCCADRAFT_102438 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
bze
Bipolaris zeicola
Pathway
bze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCCADRAFT_102438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_102438
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
COCCADRAFT_102438
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
COCCADRAFT_102438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
GDH_HM1
Motif
Other DBs
NCBI-GeneID:
19142563
NCBI-ProteinID:
XP_007714714
JGI:
102438
UniProt:
W6YI12
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MFQAQQNQGRGAPLGANRLQNGKMGGGSQWGFGAPMGAPGLSNAQTRTNNGAMSSFAQAM
GGSQPHTPLNLEEFPSLSGAPQTQQNTSAQQMWANPTLRTTQQNQQNTIGRPQGQGQQQG
QGQAGQASNQQHQNQGQDDSSQSQFSGAGDDYRFGGQGGVGQLGGVQPQTGNIDEFPPLG
GGGGDIAPDRRAGLIQNAAAFGTNANAFPGLGQTRNGLSSPTDSQQDRGINPTVGGRGLP
GGASRTPFENMRAGNPSDSNQRTAQSGNMFSLGHQIGMRSGGDLAPGAQRAQQGQFEQTF
GADAMGSPNAQSMPHKKLSEMTDSERYGLPGLLSMIPMESPDYSTLAMGQDLTVLGLDLS
RPDNLPLHPTFGSPFVESNVKPVIPPDFTLPAAYTVTNVPPLHSKMTSFSAETLLAIFYQ
YPRDILQEIAAQELYNRDWRWHIKLQQWMMKDPDLPAPIRLSPKEERGWYLFFDVNNWRR
ERREFELNYDHLDQRHGSPAMTGQM
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcacaacagaatcagggccgcggagcacccctaggcgcgaaccggttacaa
aacggaaagatgggaggcgggtctcaatggggatttggagcccccatgggcgcaccggga
ctatcaaacgcgcaaacaaggacaaacaatggtgccatgtcaagctttgcgcaagcaatg
ggtggttcgcagccacatacgccgctaaatcttgaggagttcccctcgttatcaggcgca
ccgcaaacgcagcaaaatacgtctgcgcaacagatgtgggcaaacccgacgctacgaaca
acacagcagaatcaacaaaacacgataggaaggccacaagggcaaggccaacagcaaggt
cagggacaggctgggcaagcttcgaatcagcaacatcagaaccagggccaggatgattcg
tcgcagagccagttttcgggagccggcgatgactaccgattcggcggacaggggggtgtc
ggtcaacttggaggcgtccagccgcagacaggcaacattgacgagtttccaccgttaggt
ggcggtggcggagacattgccccggatcgaagagcggggttaatacagaatgctgcggca
tttggaaccaacgcgaatgctttcccagggctcgggcaaacacggaatggcctttcaagt
ccgacggacagccagcaagatcggggcatcaatcccactgtaggtggaaggggccttcca
ggtggagcatcacgaacgccatttgagaacatgcgagcaggcaacccttcagatagcaac
caacggacagcccagtctggcaatatgttctccctgggtcatcagataggaatgcggagt
ggtggtgaccttgctccgggcgctcaacgggcccagcaaggccagttcgagcagacattt
ggggctgatgctatgggctcaccaaatgctcagagtatgccacacaaaaagctatccgag
atgaccgactcagaacgatatggattgcccggccttttatctatgattccgatggagagc
cctgattactccaccctagccatgggccaagatttgactgttctgggtttggatttgagt
cgacctgacaacttgccactacatccaacatttggttcaccctttgtcgaatcaaacgtc
aagccagtaataccgccagatttcacccttccagcagcgtacacggtgacaaatgtgcca
ccactccattccaagatgacgagtttctcagcagagacgctcctcgccatcttctaccag
tacccaagagacatcctacaggaaattgccgcacaagaattgtacaaccgcgactggcga
tggcatatcaagctccagcagtggatgatgaaagacccagatctgccagcgcccatccgt
ctctcaccaaaggaagaacgtggctggtacctcttctttgacgtcaacaactggagaaga
gagaggagagaattcgaactcaactatgatcacctcgatcaacgccacggcagccctgca
atgacgggacagatgtag
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integrated database retrieval system