Bipolaris zeicola: COCCADRAFT_103437
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Entry
COCCADRAFT_103437 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_103437
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_103437
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
COCCADRAFT_103437
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
COCCADRAFT_103437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
GATA
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
19142767
NCBI-ProteinID:
XP_007715072
JGI:
103437
UniProt:
W6Y617
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MFTSTGKTAPPQAFMSSYAPRLRSHGNSLISPIVPPSNTLPAPRVTKRGTAVLSYAEDAY
DDDDFEDSDRPRRATGLRSVQKADPLNADHSAQIAALGEELTAPIDLQGIWRDWMGRPKR
TLTEKQVLTQSVLPVTLIPIRIDMDIQAFRPDAPLPTPSNAREFGINENLPAYKQPDVTP
AYRLKDSFLWNLHEALTTPDQFAKQFVDELDLPNERKPLIISQIANQIRQQLEEYAGVAL
HPLFHSANSPAVQGTGAKPALPISSRDGTSTPVVPATNGASTPMTNGASQAEGAQTPAGI
PNGISAKATALPSEELHNPDDTYRCIVTLNINLMNRLYTDKFEWSLLHPPGFAEMFAKTT
CADLGLSGEWVNAMTHSIYEAVLRLKKEACENGGLVGDGEIDNDAVEPTIGAGWRYDQEH
LCDEWEPKVEILSPEEIEKREGDRERQIRRLRRETARFSSTSNMTGTPANEFFNNIEGQE
NMGRGERSKKKRRFRSLSPVGRGTPGAGGGGSGYGGQDGGLQEGERQTWRCSHCWVWGTA
VWAVRDGPKGPRSLCNNCGYLYERDKKLPPWSENLFYHERPMHEIPQYRPQR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaagcacgggaaagacggcgccgccccaggccttcatgtccagctatgcgcca
cgactgcgcagccacggaaactcgctcatatcgcccattgtcccgccctcgaatacgctg
cctgcaccgcgcgtgacgaaacgtggaactgccgttctcagctacgcggaagatgcctac
gacgatgacgactttgaagatagcgaccgcccgcgacgagcaactggcctccgcagtgta
caaaaggccgacccgctaaacgctgatcactcagcgcaaatcgctgctttgggggaggaa
ctcacggcaccaatcgacctgcaaggaatttggagagactggatgggcaggccaaagcga
actttaactgagaagcaagtcctgacgcagtctgtcttaccggtgacactgatccctatt
cgcatagacatggacattcaagctttccgtcccgatgcgccgctacccacaccctcaaat
gctcgcgagtttggcatcaacgagaacctgcccgcgtacaaacagcctgacgtcacccct
gcatacagactcaaggactcgtttctgtggaacctacacgaggctctaacgacacccgat
caattcgcaaagcaatttgtagatgagctggatcttccaaatgagcggaaacccttgata
atctctcagattgccaaccaaatccgacagcagttggaggagtatgctggtgttgcgctt
catcctctgttccattccgcaaactcgcctgctgtacaaggaaccggtgccaaacctgcg
ctgcccatttcgtctcgcgatggcacctccactcctgttgtcccagccacaaatggcgca
tccacaccaatgacaaacggcgcatctcaagcagagggtgcgcagacaccagcaggcata
ccaaatggcatcagtgcaaaagctacggcgctgccttcggaagaacttcacaacccggat
gacacctaccgatgcattgtcacactgaacatcaacctcatgaaccggttatacacagat
aaattcgagtggtcattgctacatcctccaggttttgcggaaatgtttgccaaaacaact
tgcgccgatctcggactgtcaggagaatgggtgaatgctatgacgcatagtatctatgaa
gctgtcttgcggctcaaaaaggaggcgtgtgaaaacggcggactagtaggtgacggagaa
attgacaatgatgctgtggagccaaccattggcgcagggtggagatatgaccaagaacat
ctctgtgacgagtgggagccaaaggttgagattctgtcgcccgaagaaatcgaaaagcgt
gaaggcgaccgcgaaaggcagattcgcaggttacggcgagaaacggcgcgcttttcgtca
acctcaaatatgacgggcactccagccaatgagttcttcaataacatcgaaggacaagaa
aatatgggccgtggtgagcgtagcaagaagaagagaagattcaggagtttaagccctgtc
gggcgcggcacacctggcgctggaggaggcggatccggctacggtgggcaggacggcggg
ctgcaagagggggagaggcaaacgtggagatgttcacactgttgggtttggggaactgcg
gtttgggccgttcgagatggtccaaaaggaccgcgcagcctgtgcaacaattgcggctac
ctttacgaacgtgacaagaaactgccgccttggtctgagaatctcttctatcacgaaagg
ccaatgcacgagataccacagtatcggccacaacgatga
DBGET
integrated database retrieval system