Bipolaris zeicola: COCCADRAFT_103444
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Entry
COCCADRAFT_103444 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bze03016
]
COCCADRAFT_103444
Enzymes [BR:
bze01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
COCCADRAFT_103444
Transfer RNA biogenesis [BR:
bze03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCCADRAFT_103444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
19142773
NCBI-ProteinID:
XP_007715087
JGI:
103444
UniProt:
W6XXY7
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MALVPSPPRDKYPPLPDDKFPWKEPPPVAITPCDPWPPPYYLEDGLRKVTPYHYTYNTYC
KQRWRGREILDIFASEFRDRPAEYYEQAIIDGRVVVNGKPVPSTKTIINNGDVISHTLHR
HEPPCTAQPIGIVHEDNDMIVINKPAGMPVHPAGRYNFNSIIEIMRADRGYGWNPLPCNR
LDRLTSGIMFIGKHKQAAEDMSAQIRGRTVKKEYITRVVGEFPEGEILCEKPILQISPKL
GLNRVRANGKEAKTVFKRLAYYPPKDDGNNTQEQEGEKGPDGQPWKKLRGYSIVRCFPVT
GRTHQLRVHLQFLGHPISNDPIYANQRVFGPSLGRGQSEDEDDEDIMSRLSRMGKEEVAD
AVAYHDEMVDAYNKRKAERMTGEKCKVCDTDLYSDPGVHELGIYLHARRYRCEEGKWDYQ
TGLPDWALPPPGYEGPTEGTEESDPLAVDLKKLGLEDEEPKEKVET
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgtgccttctcctccgcgcgacaaatatccgcctctgcctgacgacaagttt
ccgtggaaagagccgccacccgtggccattacaccctgcgatccctggccgccgccatac
tacctcgaggatggcctgcgcaaggtgacgccttaccactacacatacaacacctactgc
aaacagcgatggcggggccgtgaaatcctagatatctttgcgagcgagtttcgcgacaga
cccgccgagtactacgaacaagccatcatcgacggccgcgtcgttgtcaacggcaagccc
gtacccagcaccaagacaattatcaacaacggcgatgtcatctcccacacgctgcaccgc
cacgagccgccctgtactgcccagcccatcggcatcgttcacgaggacaatgacatgatt
gtcatcaacaagcccgcgggcatgccagtccaccccgccggtcgctacaacttcaattcc
atcatcgagatcatgcgcgctgatcggggatacggttggaatcccctaccctgcaacaga
cttgaccgccttaccagtggtatcatgttcattggaaaacacaagcaggctgcagaggac
atgagcgcgcagatacgagggagaactgtcaaaaaggagtacatcacacgggtcgtcggt
gagtttccagaaggcgagattctgtgtgaaaagcccatacttcagattagccccaagcta
ggtctcaatcgcgttcgcgccaatggcaaggaggcaaagacagtcttcaagcgacttgca
tactatccgccgaaagacgatggaaacaacacccaagaacaggagggcgagaagggtcct
gatggacagccatggaagaaactccggggctattcaatcgtgcgctgcttccccgtgacg
ggccggactcaccagctgcgcgtccaccttcaatttcttggtcatcccatctccaatgac
cccatatacgccaaccagcgcgtgtttggaccgtctcttggccgtgggcaatccgaagat
gaagacgacgaagacatcatgtcacgcctctcgcgcatgggcaaagaagaagtggccgat
gcagttgcctaccacgatgaaatggtcgatgcatacaacaaacgaaaagccgaacgtatg
acgggcgaaaagtgcaaagtctgcgatacagatctgtatagcgacccaggcgtgcatgag
ctcggcatctatctccatgccagaagatatcgatgcgaggaaggaaagtgggactatcag
actgggttgcctgattgggcactcccgccacctggctatgaaggccctactgagggtact
gaagagagtgatcccttggctgttgatttgaagaagttgggactggaggacgaagagcct
aaagaaaaagtcgagacttga
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