KEGG   Bipolaris zeicola: COCCADRAFT_103809
Entry
COCCADRAFT_103809 CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K10754  replication factor C subunit 1
Organism
bze  Bipolaris zeicola
Pathway
bze03030  DNA replication
bze03410  Base excision repair
bze03420  Nucleotide excision repair
bze03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCCADRAFT_103809
   03410 Base excision repair
    COCCADRAFT_103809
   03420 Nucleotide excision repair
    COCCADRAFT_103809
   03430 Mismatch repair
    COCCADRAFT_103809
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bze03032]
    COCCADRAFT_103809
   03400 DNA repair and recombination proteins [BR:bze03400]
    COCCADRAFT_103809
DNA replication proteins [BR:bze03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    COCCADRAFT_103809
DNA repair and recombination proteins [BR:bze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     COCCADRAFT_103809
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 AAA_16 AAA_22 AAA_33 RuvB_N nSTAND3 AAA_28 AAA_14 AAA_18 RNA_helicase BRCT_2 NACHT
Other DBs
NCBI-GeneID: 19142855
NCBI-ProteinID: XP_007715203
JGI: 103809
UniProt: W6XXI4
LinkDB
Position
Unknown
AA seq 1070 aa
MPADIRSFFGGGPPKPSQDSQKDEPAPKKAAPKKKGRTSRVKPAAKKAKREPTPEPELEE
TTTSAFFGSSNKPKRTEPVKKKAAEAPKTTPKKAAAKPSGKAANGKTSGRAKKPVTSYAE
RDDDDEFPDDDLDGADDIFRDNVKGKSKDDYQEASESDEDVPIQLPHRGTPKAPAKQQKA
IKDEDEDEFDPDDEDVDMKDLDGDDDDDFDEEEAAKTKSKKVSAASKKRKSPEHDEDEDE
EDKPAKPKAKKATPAKSPAKKKAKKDDVEDSADIQAIYDSIPTVRAPTPPPKDPNGKFNW
QANAARGDAGPTQGSSADMPQGSDTCLAGLNFVFTGVLQKWGRTESQELVKRHGGKVTTA
PSKKTNYVVLGEDAGPSKLQKIRDMNIKTIDEDGLTLLIEKLTAAGNKGDSKAQAVYAEK
QRKEQEKIEKQAAELELEEKKRQKELKAAAAAAGNKTASAVTAAAQSAGPEVDSRLWTTK
YAPTSLAHICGNKASVERLQRWLQAFPKSLKTGFKLAGKDGSGVFRAVMIHGPPGIGKTT
AAHLVAKLEGYDIVERNASDTRSKKLIEDGLRGVLSTNSLHGYFAGDGKKVEGSKKKLVL
IMDEVDGMSAGDRGGVGALAAVCKKTEVPMILICNDRRQPKMKPFDYVTFDLPFRRPTVD
QVRSRIMTIAFREGLKMPTPVINALIEGSHSDIRQVVNMISTAKIDQEVMDFDKGKAMSK
NWEKHVVLKPWDITQKILGGGMFAASSKATLNEKIELYFNDHEFSPLMLQENYLGTNPTL
SGGYSGKEKNLKNLELVSQAADSISDGDLVDRMIHGSQQQWSLMPTHAVFSFVRPASFVA
GNTAGNQTRFTSWLGKNSSANKLSRMVKEIQAHMRLRSSGDRHEIRQQYVPMLWTDLVQK
LQKEGKEAVPEIIELMDSYYLTKDDFDAIMELGVGPMDQEKVKIDSQAKSTFTRLYNQQS
HPLPFMKASSVTAPKKQAKEKPDLEEAIEESDEGEVIEEIKDEDDEDVDLSKDKYVKQPK
KKAAPKKPAAAKKGAKKKAKDEDSEDEEDEDVKPKGKGKGKAKAPAKGKK
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgccagccgatattcgcagcttctttggtggtgggcccccgaagcctagccaggattca
caaaaggatgagcctgcacccaagaaggctgcacccaagaaaaaaggtcgtacgagcagg
gttaagccagccgctaagaaagccaaacgtgaaccaacgccagagcctgaactcgaagaa
acgaccacatctgcatttttcggtagctcgaataaacccaagcgaacagaacctgtaaag
aagaaggcagccgaggcaccaaagacaacaccgaagaaggcagctgcaaagccgagtggg
aaggcagccaatggcaagacttctggacgtgcgaagaaacctgtcacatcatacgctgag
agggatgacgacgatgagtttccggatgatgaccttgacggtgcggatgatatctttagg
gataacgtcaagggtaagagtaaggacgactaccaggaggcttcggagagcgacgaggat
gttcccatccagctgccacatcgtggaacaccaaaagctccagcaaagcaacaaaaggcg
atcaaggacgaggatgaggacgagttcgaccctgatgacgaggatgtggatatgaaggat
ctggatggtgatgacgacgacgacttcgacgaggaagaagctgctaagacgaaatcgaag
aaagtatcagccgccagcaagaaacgcaagtccccagaacatgacgaagatgaagatgaa
gaggataagccggcaaagcccaaggcgaagaaggctaccccagcaaagtcaccagcgaag
aaaaaggcgaagaaagatgatgttgaagacagtgctgatatccaggctatctacgacagc
atacctaccgtacgcgctccgacgcctcctcccaaagacccgaatgggaaattcaactgg
caagcaaatgcggctcgtggcgatgcaggaccgacacaaggctcttccgctgatatgcca
caaggctcagatacctgccttgctggactgaattttgtcttcactggtgtgctgcaaaag
tggggtcgaactgagagtcaggagctggtcaagcgtcacggtggtaaagtaactaccgct
ccgagcaagaagaccaattacgtcgtcttgggtgaggacgctggacccagcaagctgcag
aagatccgggacatgaacatcaagacaattgatgaggatggcctgactctgctgattgaa
aagttgacagcagcgggtaacaagggcgacagcaaagctcaggcagtgtatgcagagaaa
caacgcaaggagcaagagaagattgaaaagcaagctgcagaactcgagttagaggaaaag
aagcgccagaaagaactgaaggctgcagctgcggcggctggaaacaagacagcatctgca
gtcaccgctgctgctcaaagcgcaggcccagaagttgactctcggttgtggacaaccaag
tacgcacccacatcacttgctcatatatgcggaaacaaggcgtcggttgagagactgcaa
cgatggctacaggctttcccgaagagtctcaaaacgggtttcaagcttgctggtaaagat
ggcagcggagtgttccgtgctgtcatgattcatggaccgcctggtatcggtaaaaccact
gctgcacatctcgttgccaagcttgaaggttacgacattgtggagagaaatgccagtgac
acccgaagcaagaagcttattgaagatggtctgcgtggtgtcctcagtaccaactccctt
cacggctacttcgctggagacggaaagaaggttgaaggctccaaaaagaagcttgtactc
attatggacgaggtcgacggaatgtctgcaggtgatcgaggtggtgtcggtgcactcgca
gctgtttgcaagaagacggaagttcccatgatcctcatctgcaacgacaggagacaaccc
aagatgaagccatttgattacgttacgttcgacctccctttccgacgaccaactgttgat
caggtgcgatcacgtatcatgacgattgcgttccgtgagggtctcaagatgcctacccca
gttatcaacgctttgattgaaggcagtcattctgatatccgccaagttgtcaacatgata
tcgactgctaagatcgatcaagaagtcatggactttgacaagggcaaggccatgtcgaag
aactgggagaagcatgtggttttgaagccgtgggacattacgcaaaagattcttggtggt
ggcatgtttgctgcgagcagcaaggctactctcaacgaaaagattgagctctacttcaac
gaccatgagttcagcccgctgatgcttcaggaaaattatctcggcacaaatcctaccctg
tcgggaggctattctgggaaggagaagaacctcaagaaccttgagcttgtgtcacaggca
gcagacagcattagtgatggcgatctggtcgaccgaatgattcacggatctcagcagcaa
tggagcctgatgcctacgcatgcagtattcagtttcgtgcgacccgcaagctttgtggct
ggcaacactgctggaaatcagactcgttttacatcgtggctgggcaagaacagctctgcc
aacaagcttagccgaatggtcaaggagatccaggctcatatgcgactgcgatcttctggt
gaccgtcatgaaatccgtcaacaatacgtcccgatgctctggactgatcttgtccagaag
ttgcaaaaggagggcaaggaggcggtgcccgagattatcgagttgatggacagctactac
ctcaccaaggatgactttgatgcaatcatggagctgggtgttggtcctatggatcaagaa
aaggtcaagattgattctcaggcaaagtcaacctttactcgactatacaaccagcaatca
catcctctgccttttatgaaagcttcgtcagttacggcaccaaagaaacaagccaaagag
aagccggacttggaagaagcaattgaagagtcagatgagggtgaagtgattgaggaaatc
aaggacgaagatgacgaggatgtggatctttcaaaggacaagtacgtcaagcaaccgaag
aagaaggctgcgcccaagaagccggctgcggcgaaaaagggggcgaagaagaaggccaaa
gatgaggatagtgaggacgaggaggacgaggatgtcaagccaaagggcaagggaaagggc
aaggcgaaggctccagcaaagggaaagaagtga

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