Bipolaris zeicola: COCCADRAFT_105630
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Entry
COCCADRAFT_105630 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
bze
Bipolaris zeicola
Pathway
bze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCCADRAFT_105630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_105630
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
COCCADRAFT_105630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
19143244
NCBI-ProteinID:
XP_007715901
JGI:
105630
UniProt:
W6Y415
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MVVPTVTLTHLNRADGSATYTQNGYSIIGAVNGPIEVQRRDELPEEAAIEVNLRPAAGVG
SPRERHLETLVHNTLRSIILTQSIPRTLVQITLQVRSLPEEDSTAGVNTSLSLLPHLLHT
ALLALLSASIPLSTTLTSVLVAQPAPPSSALLFPTANQLLRAKPIRSVHVFAFSGKRKML
LSESEGSFSYEDWNEACQMAEETCCGEDDSEDQGGIKLDVEGDAMEIDAQAEAESLDKWL
RSVVKRKVEHEQRWRSAT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcccaacagttaccctcacccacctgaatcgtgccgatggctcagcgacatat
acacagaatgggtactccatcatcggcgccgtcaatgggccaatcgaggtgcagcggcgc
gatgagttgccagaagaagccgccattgaagtcaacctgaggccagccgcgggcgtagga
agcccaagagagcgacacctcgaaaccctcgtgcacaacacgctgcgcagcattatcctg
acgcaatcgataccacgaacactggttcaaatcaccctgcaagtgaggagcttaccagag
gaagatagtaccgcaggtgtcaatacgtctctttctctcctcccccacctcctccatacc
gcgcttctcgcccttctctctgcctcgatacccctatctacaactctcacatctgtactc
gtcgcgcaacctgccccaccttcttcggcgcttctattcccgaccgccaaccaactcttg
cgcgcgaaacccatacgctcggtccatgtcttcgctttttcgggcaagagaaagatgttg
ttgagtgagagcgaaggatcctttagttatgaagattggaacgaagcctgtcaaatggct
gaggagacgtgttgcggcgaggacgacagcgaagaccaaggcggcatcaaattggacgtt
gagggcgatgcaatggaaattgacgcgcaggctgaagcagagagcttggacaagtggctg
aggagcgtggtgaagagaaaagtggagcacgagcaacggtggaggagcgcgacctga
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