KEGG   Bipolaris zeicola: COCCADRAFT_109016
Entry
COCCADRAFT_109016 CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
bze  Bipolaris zeicola
Pathway
bze03040  Spliceosome
bze04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCCADRAFT_109016
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    COCCADRAFT_109016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bze03041]
    COCCADRAFT_109016
   04121 Ubiquitin system [BR:bze04121]
    COCCADRAFT_109016
   03400 DNA repair and recombination proteins [BR:bze03400]
    COCCADRAFT_109016
Enzymes [BR:bze01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     COCCADRAFT_109016
Spliceosome [BR:bze03041]
 Complex B
  Other components
   Prp19 complex
    COCCADRAFT_109016
 Complex C
   Prp19-CDC5 complex
    COCCADRAFT_109016
Ubiquitin system [BR:bze04121]
 Ubiquitin ligases (E3)
  U-box type E3
   COCCADRAFT_109016
DNA repair and recombination proteins [BR:bze03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    COCCADRAFT_109016
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40 ANAPC4_WD40 Beta-prop_WDR19_1st EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_HPS5 Beta-prop_EML Beta-prop_Vps41 eIF2A Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd B-prop_COPA_B_2nd PEP5_VPS11_N WD40_like U-box WD40_MABP1-WDR62_1st KNTC1_N Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_2nd Beta-prop_CAF1B_HIR1 DUF3450 PQQ zf-Nse V_ATPase_I_N DUF5711 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 19143828
NCBI-ProteinID: XP_007717204
JGI: 109016
UniProt: W6XS83
LinkDB
Position
Unknown
AA seq 471 aa
MLCAISGEAPREPVASRKSGNVFEKRLIEAHIAEHHTDPVTGEDLATEDLIELKSPNVVT
PRAPNFTSIPAMLSAFQNEWDALVLETHTLKQHLAQTRQELSTALYQNDAATRVIARITK
ERDEAREALSNVTISGGAQGDAMQVDNQGLPQDLIKVVDDTQQELFGSRRKRAVPEGWAT
GGVITNYDLVKSTEAIYPGSSNIAVQEGGLVLFGGSDGTAGIYALAEGKVTQTFNAGSAI
TAAAWCGGRAVVGTSAGVAKIFEQGNEVAQVGSHAGAVTSISVHPSGKMLATAGADKHYA
VHELTSFKTVSQVYVEAEITCVAFHVDGMLFFVGSSDGNIRIYDIKTGAAMAQLETGGPI
VDLRFAENGTWFAVAQQGSTSVSVWDIRKQTVIYTLESGSPVTCCEWDYSGMYLAIGGTG
SVSVQQFTKATKSWAELVRKALPVKDVAWSGKAESVVALTPEGGLAVLAAP
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgctctgtgcaatctccggagaagctccccgcgagcctgttgcctcgcgcaagtcgggc
aacgtcttcgagaagcgtctgattgaagcgcacatcgcagaacaccacaccgacccggtt
acgggagaagacctggcgaccgaggacctcatcgagctcaagtcgcccaatgtcgtgacc
ccacgcgcgcccaacttcacctcgatacctgccatgctcagtgccttccaaaatgaatgg
gacgccctggtactagagacacatacgctcaagcagcacctggcgcaaacgaggcaagag
ctgagcaccgccctgtaccagaacgacgccgccacacgggtaattgcacggataacaaaa
gagagggacgaagcgcgcgaggctctgtcaaatgtcaccatcagcggaggcgcccagggt
gatgccatgcaagtcgacaaccagggcctgcctcaggatttgatcaaggtggttgacgac
acacagcaagaattgttcggttcgcgccgaaaacgagctgtaccagagggctgggccact
ggtggagttatcaccaactacgacctggtcaagtcaacagaggctatatacccaggtagc
agcaacattgccgtacaggaaggcggtctggtcttgtttggtggatcagacgggacagct
ggcatctatgcgctggctgagggcaaggttacacagaccttcaacgctggtagcgccatc
acagcagcagcttggtgtggaggccgtgcggttgttggaacttcagctggtgtagccaag
attttcgagcaaggcaacgaggttgcccaagtaggatcgcatgctggagctgttacatcc
atttccgtccaccccagtggaaagatgctcgcaacagcgggtgcagacaagcactatgct
gttcacgaacttacttcgttcaagaccgtttcccaggtctacgtcgaagcggaaatcaca
tgcgttgccttccacgtggatggtatgctcttctttgttggaagctccgatggcaatatc
cgcatctacgatatcaagactggcgctgctatggcccagctagaaacaggcggcccgatt
gtggacctcaggtttgctgaaaatggtacttggttcgctgttgcgcagcaaggttctacc
agcgtctctgtttgggatatccggaagcaaacagtcatttacaccctcgagtccggaagc
ccggtcacgtgctgcgaatgggactatagcggcatgtatctggcgattggtggcactggt
agtgtgtcggtgcagcagttcacaaaggcaaccaagagctgggccgaacttgtgaggaag
gcattaccagtcaaggacgttgcatggagtggaaaagccgagagtgtggtagctctgaca
ccagagggtggtttggcggtattggctgctccttag

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