Bipolaris zeicola: COCCADRAFT_110061
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Entry
COCCADRAFT_110061 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12874
intron-binding protein aquarius
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_110061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_110061
Spliceosome [BR:
bze03041
]
Complex B
Other components
Prp19-related factors
COCCADRAFT_110061
Complex C
COCCADRAFT_110061
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_12
Aquarius_N_3rd
AAA_11
AAA_19
ResIII
AAA_30
DnaB_C
AAA_16
AAA
UvrD-helicase
SLFN-g3_helicase
DEAD
AAA_22
NB-ARC
nSTAND3
DNA_topoisoIV
Motif
Other DBs
NCBI-GeneID:
19144027
NCBI-ProteinID:
XP_007717604
JGI:
110061
UniProt:
W6XRZ6
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MSSTTSPGASAAHAADLASLHARPTVADLHGENHFAQVARKNWLAAKKTPKVRPEVVKKE
LWDQLESADFAYSSLLILENLQLLERYLWPGFTEDASNYHHLLLALMVNVKRRENLSSWE
HFSTKPDEFSSFFRRILSMTVDPSQPSKIRTQLISFVIGAFQSLDSGLVRKECAPLVGIS
IWQNLHSDAVREHHFEQHSMLRKAWRAASKRYDAGDDALQARLRFERSWLYTLLLDFIDR
LYNSSNSQDMRDNMAYCERFMELLIDLQSQLPTRRYVNTLLKDLNMLSAIRLSPMYADED
NGLFRDLFDLLSHFTNFSIEDQTGRQLSKLEYDQQHYDLLSKLQRTGYATFQEKLQLMAL
ANYKSIGNREELDGHLRTLSDEELVELCSLMGLRTEYPATTYLVRDRAFYMETLIMLVEQ
RPTFKDTIRDMSVLPTEKILYETTFLRNESYDGSRPLAIPKLNLQYLTMGDFLWRSFILY
RAESFYGIRKDMEDVVKRVKPKGRGVNTKFTGVSKMSLPIMKPAIVDVAPSRVGEEHPAY
VRAEIILDVSRLQYPVRRDWEQLRPDDVVFLLAVEGKDDVPMRNGHHADVGSGEEIGLRR
MRCAQVVQVLDDKGRPLREQARDDGFGPRARQRRLLVNIDAKQYYADMEQTAKGAPNVYE
QINLIVRRKGRENNFLPILESIKRLTLSDIPAPSWLQEVFLGYGDPSSASYKRLPNRLNK
IDFRDTFLDWEHLVQSFPGKSVEPNEEAHAPVEPPYLLEFPVAAEPEDAPPRASKKRRRD
QAEVAQPVQELVRVSSYKPPNMGPYPADAPKLNKVRFTPAQVDAITSGTQPGLTVVLGPP
GTGKTDVATQIISNIYHNFPDQRTLLVAHSNQALNQLFQKIVALDIDERHLLRLGHGEED
LETDASYSKHGRVESFLERGQYYLSEVDRLAKNFGAPGAHGSSCETADYFNLVYVKPAWT
QYWDSVTSGETSVEQIITEFPFKDYFSNAPQPLFPPAVDRQQILDIAQGCYRHVQKIFAE
LEDIRPFELLRNPRDKANYLLVKEARIIAMTSTHAAMRRQEIASLGFHYDNVIMEEAAQI
TEIENFIPLALQNPQNGELPLQRIVLCGDHLQNSPVIQNLAFRQYANLEQSLFQRLVRLG
VPTIMLDQQGRARASIAELYKWRYPSLSNLPSVVSNPEFQIANPGFKHEYQFIDVQDYKG
KGEEQPTPHWMINLGEAEYAVALYMYMRLLGYPANKISILTTYAGQKSLINDVLGHKCKN
NPLFGRPRIVATVDKYQGEQNDYIILSLVRTRSIGYLRSIRRLTVALSRARLGLYILGRR
SVFESVFELKPAFDILLQRPDKLELVTDEMFGETQRHVDSAATTIPGEAQMQDVEHLGKY
VYEMTKAKVEAIKANGGVMPSTAPEVQMGEAGVNGASHPVHDEEDDDRPENVLIPTEVAE
DFEGEDEEE
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccactacctccccaggcgcgtccgctgcgcatgcggccgacctagccagccta
catgcccgcccaactgtcgccgacctgcatggcgagaaccacttcgcgcaagtcgcgagg
aagaattggctggccgcaaaaaagacgcccaaagtgcgccccgaagtcgtcaaaaaggag
ctctgggaccagctggagagcgccgactttgcatactcgtcgctcttgattctcgagaat
ctgcagctgttggagcgctatctgtggcctggatttacagaggatgcatcaaactaccat
catctgctcctggcccttatggtcaatgttaagaggagggagaacctgtcgtcttgggaa
cacttctcaactaagcccgacgaattctcatccttcttccgtcgcatcttgtccatgacc
gtcgacccctcgcagccaagcaagatccgtacacaactcatatcctttgtcatcggcgcc
ttccaatcactcgacagtggcctggtgcgaaaagagtgcgctccactagttggcatatcc
atatggcagaacctgcattcagatgctgtgcgcgaacatcacttcgagcagcacagcatg
ctacgcaaggcttggagggctgcatcgaagcgctacgacgctggagacgatgccctacag
gctcgcctacgctttgagcgctcgtggctttacaccctccttctggacttcattgaccgt
ttatacaacagtagcaatagccaagacatgagggacaatatggcctactgtgagcgcttc
atggagctgctaatagacttgcagagccagttgcctacaaggagatatgtcaacactcta
ctcaaggacctcaacatgctctcggctatccgattgtcgcccatgtacgccgatgaggac
aacggcctgttccgcgatctatttgacctgctcagccacttcaccaacttctccatcgag
gaccagactggcagacaactgtcgaaactcgagtatgatcagcagcattatgaccttttg
tccaagttgcaacggacgggctacgctacattccaagaaaaactccaacttatggcactg
gcaaactacaagagcattggaaatagggaagagctggatggccacctgcgtacactgagt
gacgaagagcttgttgaactttgctcgctcatgggtctacgaacagagtatcccgcgacg
acgtacttggtgcgggatcgcgctttctacatggagaccctaatcatgctcgtcgagcaa
cgcccgactttcaaagacacaatccgcgatatgtcagtactaccaacagaaaagattctt
tatgaaactacgtttttgcgaaacgaatcctacgacggctcacgaccacttgccattcca
aagctgaacctccagtacctgaccatgggcgatttcttgtggagatcatttattttgtac
cgggccgagtcgttctacggtattcgcaaagacatggaggacgtcgtaaaacgcgtcaaa
ccaaaaggcagaggcgtcaacaccaagttcaccggtgtatcaaaaatgtcactgcccatc
atgaagcctgccatcgttgatgtggcaccatcaagagtcggagaagagcaccccgcctat
gttcgagcagagatcatacttgatgtcagtcggcttcagtatccagtacgtcgggactgg
gaacagctccgaccagatgatgtagtctttctccttgctgttgagggaaaagacgacgta
cccatgcgaaacggtcatcatgcggatgtcggcagtggagaagagattggtctgcgtcgg
atgagatgtgcccaggtggttcaagttctggacgacaagggacgaccattaagagaacaa
gcccgtgacgatggctttggaccaagggcaaggcaacgacggctccttgtcaacatcgat
gcgaagcagtactacgccgatatggaacaaacagccaaaggagcgcccaacgtctacgag
caaatcaacctcattgttcgccgaaaaggacgtgagaacaattttttgccgatcctagag
tcaatcaagcgcctaaccctctcggatatcccagcaccatcttggctgcaggaggtcttt
ttgggctatggagatccttcatctgcatcctacaagcgactccctaatcggctaaataag
attgactttcgcgatacctttttggactgggagcacctggttcaatcatttcccggcaaa
tccgttgaacctaacgaggaagcacatgcacctgttgagcccccatatcttttagagttt
cctgttgcagcggaaccagaggatgcaccaccacgagcgtcaaaaaagcggcgccgggac
caggctgaggttgcacaacctgtgcaggaattggttcgcgtatcctcgtacaagccaccg
aacatgggtccatatcctgcagatgcgccaaagctgaacaaagtccgattcacacctgcc
caagttgatgccatcacttcgggaactcagccgggattaacagtggtgctcggaccacca
ggcaccggcaagacggacgtcgcgacccagattatatccaatatatatcacaacttcccg
gaccagcggaccttgcttgttgcacacagcaaccaggcgcttaatcagctattccagaag
attgtggcgcttgatatcgacgagcgtcacctattgcggttgggtcatggtgaagaggac
ctcgagacggatgcaagctacagcaagcacggacgagtggagtcgttccttgagagagga
caatactatttgtctgaagttgaccgtctagccaaaaactttggtgcaccgggtgcccac
ggtagctcgtgcgagactgcagattacttcaatcttgtctatgtgaaaccagcgtggacg
cagtactgggatagtgtcacatccggggaaacgagtgttgagcagataatcactgagttc
ccattcaaagattacttctcaaatgcaccacaacctctcttccctcctgcagtagaccgt
caacagattcttgatattgcacagggctgctatcgccatgtccagaagatctttgcagag
ctcgaggacattcgtccgtttgagcttctgcgaaacccgcgagacaaggcgaactacctg
cttgtcaaggaagcccgcatcattgcaatgacatcgacacacgctgccatgcgaagacaa
gaaatcgcatcgctagggttccactacgacaatgtcatcatggaggaagctgctcaaata
acagagattgagaacttcatcccactcgcattgcaaaatccacagaatggcgaacttcca
ttgcaacgtatagtcctctgtggtgatcatcttcaaaactctcctgtcattcaaaatctc
gcattccgccaatatgccaacctggaacagtcgctcttccaacggcttgtccgcttaggc
gtaccgaccattatgcttgaccaacaaggtcgcgcccgcgcgtccatcgccgagctctac
aaatggcgttatccttcgctctctaacctgccttctgttgtctccaaccctgagttccaa
atcgcgaacccaggcttcaagcacgagtaccagttcatcgatgtgcaagactacaagggt
aaaggagaagagcagcccacaccacactggatgatcaacttgggtgaagccgaatatgcg
gtcgctttgtacatgtacatgcgattgcttgggtaccccgcgaacaagatatcgattctc
accacgtatgctggccaaaagagtttgatcaacgatgtcctaggccacaagtgtaagaac
aacccactgttcgggcgcccgaggatagtagctacggtggacaaataccaaggcgagcaa
aacgactacatcatcctctctcttgtccgcacccgctcaataggctacctccgctccatt
cgacgtctcaccgtcgcgctctcccgcgctcgcctaggcctctacatcctcggccgccgc
tctgtcttcgaatccgtcttcgagctcaaacccgccttcgacatcctccttcagcggccc
gacaaactcgaactcgtcaccgacgaaatgttcggcgagacgcagcgtcatgtcgactcc
gccgctactaccatccccggcgaggctcagatgcaggatgtagagcatttgggtaagtac
gtgtatgaaatgacgaaagcaaaggtcgaagctatcaaggcgaatggcggcgttatgccg
agtacggcgccggaagtgcagatgggcgaggcgggcgtgaatggtgccagccatccggtg
catgacgaggaagacgatgataggcctgagaacgtgcttatccctacagaagtagcagag
gatttcgagggcgaagatgaggaggaatag
DBGET
integrated database retrieval system
