Bipolaris zeicola: COCCADRAFT_111516
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Entry
COCCADRAFT_111516 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
bze
Bipolaris zeicola
Pathway
bze00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCCADRAFT_111516
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bze01007
]
COCCADRAFT_111516
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bze03016
]
COCCADRAFT_111516
Enzymes [BR:
bze01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
COCCADRAFT_111516
Amino acid related enzymes [BR:
bze01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
COCCADRAFT_111516
Transfer RNA biogenesis [BR:
bze03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
COCCADRAFT_111516
Prokaryotic type
COCCADRAFT_111516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DivIC
Dynactin_p22
DUF4407
HAUS-augmin3
LIP-1
Sec2p
FapA
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
19144305
NCBI-ProteinID:
XP_007718192
JGI:
111516
UniProt:
W6Y8U9
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MRAFRHSLTECTAKPTKSLRPVVLSSRRNYAQPAFAPKPTIDIKHIRQNPGLYEQNCIDR
NYGAHSKSSWRIIELHDQWLALQQSSRSLRERNNQLRAKLARAAAQAKSGDGQSAALQKG
TIADAKALKEELSSIEAQETQIQDEIEALAQDLPNLSSTYTPVGDDFEVVGYINAQSESE
PLQSASRKSHVDIGQELGILDFSGSSQTSGWGWYFLVGDGAMLEQALVQYALSVARNKGW
KAVAPPSIVYSHIAAACGFQPRDQNGEQQIYAIEQSEKDKAKPQLALAGTAEIPLAGMYA
NHKFEQAELPLKTVGVSRCYRAEAGARGANTKGLYRVHEFTKVEMFAWTIPDHAGEDYFA
AQPASSSEAVFEEMLAIQKEILEALGLQCRILEMPTTDLGASATRKLDIEAFFPSRREKD
QGWGEVTSTSMCTDYQSRRLQTRVRVKGKLEFPYTVNGTALAVPRVLAAILENHWNEQER
TVTIPEVLRPFMGGQAKIGAQP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagagcttttcgacactcgctcacagagtgtacagctaaaccaacaaaatcgcttcgc
ccagtcgtgctatcatcccgcagaaattacgcccaacccgcattcgcgcccaagcccaca
atcgacattaagcacatcagacagaacccaggtctctacgagcagaattgtatagatcga
aactatggcgcgcatagcaaatcatcatggcgcatcatagaactacacgaccagtggctc
gccctgcagcagagcagtcgtagcttgcgggagcgcaataaccagctgcgagccaaactc
gcaagggcagcggcgcaggccaagagtggcgatgggcagtctgctgccttgcagaaagga
actattgcggatgcgaaagctctcaaggaagaattgagctctattgaagctcaggagacg
cagatacaagatgagattgaagctctggcgcaggaccttcccaacttgagcagcacgtac
actccagtcggcgacgattttgaagtagtgggctacatcaatgcgcaatccgagagcgag
ccactgcaatccgcgtctcgaaagtcgcacgtagacattggacaagaactgggcatcctc
gacttctcaggctcgtcgcaaacgtcaggatggggctggtactttcttgtcggagatgga
gcaatgctggaacaagctctggtacaatatgctctgagcgtcgcgcggaacaaagggtgg
aaagcagtggcacctccttcgattgtctactcgcacattgcagccgcatgcgggttccag
ccgcgggaccagaacggagagcagcaaatctatgccattgagcagtccgaaaaagacaaa
gcgaagccccaattagcccttgctggcaccgcggagataccgcttgcgggcatgtatgca
aaccacaagttcgaacaagcagagctaccactcaagacggtcggcgtcagtagatgctat
cgtgctgaggcgggggcaagaggcgccaacaccaaaggcttgtatcgcgttcacgagttc
acaaaggttgaaatgttcgcttggacaatacctgaccacgcgggcgaagactactttgct
gcccagccagcatcaagttccgaagcagtctttgaggaaatgctggcgatacagaaggag
atattggaagcactggggctgcaatgtcgcatcttggagatgccgactacagatctcggg
gcgagcgctacaaggaagctggacattgaagccttcttcccctcacgacgagaaaaggac
caaggctggggcgaggtgacgtcaacttcaatgtgcacggattaccagagccgtcggcta
caaacgcgagtgcgtgtcaagggcaagctggagtttccatacacagtcaacggaactgcc
cttgctgtgccgcgggtgctggcagcgatcctggagaaccactggaacgaacaggagcgc
actgtaacgataccagaggtgctgcgaccctttatgggcggacaggcgaagattggagca
cagccctag
DBGET
integrated database retrieval system