Bipolaris zeicola: COCCADRAFT_1229
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Entry
COCCADRAFT_1229 CDS
T03110
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COCCADRAFT_1229
Enzymes [BR:
bze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
COCCADRAFT_1229
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Ortholog
Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
CYTH
EMC7_beta-sandw
DUF4198
GETHR
Motif
Other DBs
NCBI-GeneID:
19144731
NCBI-ProteinID:
XP_007707683
JGI:
1229
UniProt:
W6YRF4
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MKALLPLLCGGAGIVASASAYSQHPSAPEQPKSFFRQIGNSTWILGNELWNVTQNAQYAT
KLMYRGKDRVGEAVGHYVSYNGAASDLRWTTASIAASGSNWLDIRFSAAEGDFHWVLHDH
LAGAYQYFINRGLPTLGEFRSLWRLSNTSFPHASTNTKTGLLPPLSLYQNATNVQDETWQ
QSDGTFLTKYDWAAFLREQTAYGVWGDEVGSWYLHAGKEYLNGDHLKQELMVHRESKTGD
TVQLNMLHGTHYQASSRDSFAAGNDEARIWGPWLWYLNDGSRQDAVERWEREEKEWPYAW
FENAAYQSRGAVQGKLVLSDGRPAAGAAVFLGDNRNETVSTLDQGQNYYYTAYADDAGEF
RIRDVRSGTYALYAWGNGRSIADVITNFTHNDVEIVKRKTTSLPLLTWSVTDKTKRIFQI
GDFDRKTDGFYLADPAIPVQHARIDKCPANLTYTVGTSTPPKDWCFGQSKVGTWSVSFPA
SLDNSTAAKLVVSLAGFSQGSSADILLNEAKIGNITSASLANSQDTYRGATRAGEWRRLE
FGVPRGLLKEGQNRLDVRVTKSTQWRGWLWDSLVLEAV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccctcctccctcttctctgcggtggtgcaggcatagtagcatccgcatccgca
tactcacaacacccaagcgcccccgaacaacccaaaagcttcttccgccaaattggaaac
tcaacatggatcctagggaacgaactctggaatgtaacgcaaaacgcacagtatgcgact
aaattaatgtatagaggaaaagatcgtgtaggggaggccgtgggacattatgttagttac
aacggcgcagcatccgacctccgctggaccaccgcttccatcgccgcatccgggtcaaac
tggctcgacatacgcttcagcgctgcggaaggcgatttccactgggtccttcacgaccat
ctggcgggcgcataccaatacttcatcaaccgcggcttgcccactctcggcgaatttcgg
agcctctggcgcctctcaaacacctccttcccacacgcctctacaaacacaaaaaccgga
ctcttgccccccttgtccttgtaccaaaacgctacaaatgtgcaggacgagacgtggcaa
cagagcgacggcactttcttgacaaaatacgactgggctgcttttctgcgcgagcagacg
gcgtatggggtgtggggggatgaggtggggagttggtatttgcatgcggggaaggagtat
ttgaatggggatcacttgaagcaggagttgatggtgcatcgagagagtaagacgggggat
acggtgcagttgaatatgctgcacgggacgcattatcaagcctcatcgcgcgattcgttt
gccgcaggcaacgatgaggctaggatttgggggccgtggctgtggtatttgaacgatggg
agtcggcaagatgctgtggagcggtgggaaagggaagagaaggagtggccgtatgcgtgg
ttcgagaatgcggcgtatcagtctcgaggcgcggttcagggaaagctggtgctgagtgat
ggacggcctgcggctggtgcagcggtgtttctaggcgataatcgcaatgagacggtgtcg
acgctggatcagggacagaattattactacacggcctacgcggatgatgcgggcgagttc
cgtatccgcgacgtgcggtccggcacgtatgccttgtatgcgtggggaaacggcagatcg
attgcggatgtcataacgaactttacgcacaacgatgttgaaatcgtaaagagaaagacg
acatcgttaccgttacttacttggtccgttacagacaagacaaaacgcatctttcaaatc
ggagatttcgaccgcaaaacagatgggttttatctggcagatccggcaattccagtccag
cacgctcgcatagataaatgtccggccaatctaacgtataccgtcggtaccagcacgcca
ccaaaggactggtgttttggtcaatctaaagtcgggacttggtcggtttcttttccggcc
tctcttgacaatagtactgctgctaaacttgtcgtatctcttgccggcttttctcaagga
agcagcgctgatattttgctcaacgaggctaaaatcggtaatatcaccagtgccagcttg
gctaatagccaggatacgtatcgtggtgctacaagagccggggagtggagacgcttggag
tttggagttccacggggcctgctcaaagaagggcagaataggctagacgtcagggttact
aaaagcacacagtggaggggatggctgtgggacagtctggttttggaagctgtgtag
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