Bipolaris zeicola: COCCADRAFT_1363
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Entry
COCCADRAFT_1363 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
bze
Bipolaris zeicola
Pathway
bze03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCCADRAFT_1363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bze03009
]
COCCADRAFT_1363
Ribosome biogenesis [BR:
bze03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
COCCADRAFT_1363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
HEAT
HEAT_EZ
IFNGR1_transm
Cnd1
HEAT_2
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
19144766
NCBI-ProteinID:
XP_007707899
JGI:
1363
UniProt:
W6YJF5
LinkDB
All DBs
Position
Unknown
AA seq
1766 aa
AA seq
DB search
MATALQKQLATIAASSTHQLDLRAQKAAHGKSLLFEPKIAASQSFENVYLICYEGYRELC
ALDSRFLRFSKNLFSEQSKAEDRTQMTKDENSKLDVVLEAFITLVGPRLLLKPAEKALEW
LVRRFRIHEYNTECLVFTYLPYHNTPQFLALLSILPPQPSHAIRFLFPYIQAPTNVPQRT
IAYTAINTPQFFKAYHTYVAKVVEAGHQAAHMLSFWSGITVEAIYGILSNSNSGKKHLQD
QSTEKLVLDLLPVLNSCMHAKHGADTVLACYAIVIMLVNQAKVGDKVLDGLMEAVITAHD
ETSLQSCLGCLAIIANERSKAQLPTKVAKKLLKVPQLVQRLKSVSEQCQAERLVLGCALG
ALNVGSEENHAIFHELIASGLISKSRIQIVLSAVAQLLRDSVPGSETHGELLQVATRLVE
SKDLSSMLQDAAKQNNVDLESLGLTIAQTFEIEAIQDMDSDEEMVDIDEAAEKPVVEVPD
ITVTSFLDAGSEKEFAKAAHAFEQAVLTKQAKQFLASDALHQEAALQQTRYLSFLARVWN
STRPVAVRIAALRATASSLEKSEVAHTLQNLLPYFVHALADPSPHIRRSAAACISLLTRK
ASARSKAQSWGKSDVYGKASKNITDLKPEDVYVFIVSMLQPMLEECVMDAHFIIPALRSV
LEGTQLQNQSKQTFKMQTRTAILSFFANHAGCTPLLRVRLCLLPIFNIRGKVSDTVRTNF
VLPLLNEWSTLPIDAVTNQCSSEVISLDDAERSHLAAIIPREAKSAQLLQDIVSGTLNKE
REVLVVAAFGQVHTSWSAFRSESRHSLAQCMLGLALSESDDSFDRLCREQSIEILRNVNL
DSEILVSFLDSVPSPTAMPGGPPAAKRRRTSRSEMARVELSSQDDVQRLLRRLTLVLELV
EGSNPGQHPELFKSLFGIFAEMQPLKQQSESELVYLQSIILGSLSPIVRTLMEMPDTADY
QSAVRADLLIDCIRHSSSPQVQNSALLLISNLASWVPDLILHNLMPIFTFIGSTLLRQHD
DYSAQVVDKTISRVVPQLAASLRSKHRDFIAGVSDLLLSFTAAFEHIPLHRRMKLFAQLA
RTLGPEDSLPAIVALLADRYHSKEQRRFCADLLLYFDPINTLVTFKGYLDLLTDATGPKP
QVAETLFGLKEKTKENKFDSGIQSMLTCLTDLALDDKVKAHVTRAYRKKDDPERPRRIFA
DIIETTIQLSKKLASNSKTYAACSRVLASCLDLLPTTDLIKSAELLLSSTDSHVQVAAVK
SVELRAGTAKQNDRKSVEALISFLPSVQTLLQQTSEMDAKMVSVSCIDRIIERFGKKDVS
AVSSVAQTIAGPESLSSNDDRIRILSLICLTSVIDVLEDEAISLLPTIVPIAFEYLSNAI
DEEKAGLHNAVFTLLANIVDRLGYMFSREYLDTALRLSQRSAAADLEDACDETRASFYQS
VSQHLSGQEVFSSIKTTWSNAASQGFDALFEQLQLLQSTINAQTKAKLVKASSPLFSLFL
QTFRMRDTLQSETEEEIDEEETEQLEATLIESVIAMVLKLSDATFRPFFVQLIDQEGPLP
AKPERAITFYKFLAAFFDKFKSLVTSYSSYIIEPTAKILTHLAKNDTEVATRTAVLSALQ
KSFQHDQDGFWQAPSHFGTIMPPLLSLLSLPSASSSTPENNTNNVIPTITDLAAASSSSM
ENHREMNTTLLKNMRSEDRNTRLATVLCEQSLTRRLGEEWLGLLPEMLPFISELMEDDDE
IVERECQRWKNGMEEILGESLEGMLQ
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgcttcagaaacagctcgcgaccatcgcggcctcgagcacccaccaactc
gacctgcgcgcccagaaggcggcacacggcaaatctctgctgttcgaacccaagatcgct
gcatcacaatcatttgaaaatgtttatttaatatgttacgagggctaccgggagctgtgc
gcgctggattcgaggtttttgcgcttctccaagaatctcttcagcgagcagagcaaagcc
gaagaccgcacccaaatgaccaaggatgagaattctaagctcgatgttgtgcttgaggcc
ttcattacactggtcggcccccgattgctgctcaagccagcagagaaggcgctggagtgg
cttgtgaggagattccgcatccatgaatacaacaccgaatgcctcgtcttcacttacttg
ccttaccataacacgccccaattcctcgctctgctgtccatcttgcccccgcagccatcg
cacgccatccgcttcctcttcccctacatccaggcccccaccaatgtacctcagcggacc
attgcctacacagccatcaatacgccccagttcttcaaggcttatcacacatatgttgcc
aaagtagtggaggcaggccatcaggctgctcacatgctgtccttctggtctggaatcact
gtcgaggcaatctacggcatactgagcaactcaaactccggcaaaaagcatctccaagac
cagagtactgagaagctggttctggatctacttccagttctcaacagctgcatgcacgcc
aagcatggagctgacactgtcctagcctgctacgccatcgtcatcatgttggtgaaccag
gcaaaggttggagataaggttttagatggtttaatggaggctgtgattacagctcatgac
gaaacatcacttcaatcctgcctgggctgcttggcaatcatcgcaaacgagcgctcaaag
gcacagctcccgacaaaggttgcgaaaaagcttcttaaggtgccgcagcttgtacaaagg
ctcaagagtgtatccgagcagtgtcaggccgagcgacttgtactgggctgcgcgctcggt
gcgctcaacgtcggctcagaggaaaaccatgccatcttccatgagcttatcgcatcgggt
ctgatcagcaaatcccgtattcaaatcgtactgtcagcggtagctcagctactgcgcgac
agtgtgccaggctctgaaacgcatggagagttactccaggttgccaccagactagtcgaa
tcgaaagacctgtcatccatgctgcaggatgctgcaaagcagaataatgtcgatctggaa
tccctcggactgaccattgcgcaaactttcgagattgaggctattcaagatatggattct
gacgaagaaatggttgacattgatgaggctgctgagaagcccgttgtagaggtgccagat
atcacagttaccagcttccttgatgcaggatcagaaaaggaatttgccaaggctgctcat
gctttcgagcaggcagtgttgaccaaacaggccaaacaatttcttgcttccgatgcactg
caccaggaagctgcactccagcaaacgcgctacctatccttccttgcccgtgtctggaac
agtacccgcccggttgccgttcgtatcgccgctctacgtgctacggcctcgtcactcgag
aagtcggaggttgcccataccctgcagaaccttttgccgtactttgtccatgcgctcgcc
gacccatcaccccacattcgacggtccgctgccgcttgcatcagtcttttgacgcgaaag
gcctccgcgagatcgaaagctcagtcgtggggcaagtctgacgtgtacggcaaagcttct
aagaacatcacagacctgaaacctgaagatgtttacgtttttattgtctcgatgctccag
ccgatgcttgaggagtgtgtcatggatgcacatttcatcattcctgcgctccgcagtgtt
ctcgagggaacgcagttgcagaaccaatctaaacagactttcaaaatgcaaacacgaacg
gccatactcagcttcttcgcaaatcacgccggttgtacacccttgctaagagtccggttg
tgtttgctcccaatattcaacattcgcggaaaggtctcagacactgtccgcaccaacttc
gtccttccattgttgaacgagtggtctactcttccaattgatgctgtaacaaaccagtgc
agcagcgaagtcatctctcttgatgatgctgagcgctcgcacctcgctgcaatcataccg
agggaggcaaagagtgcccagttgttgcaagatatcgtctctggaacactcaacaaagag
cgggaagtgctagtagtagctgctttcggtcaagttcacacttcatggtctgctttccga
tctgaatctcgacattcccttgctcaatgcatgctaggtttggcgttgagcgagagcgac
gactctttcgacagactttgcagagaacaatccatagagatcctacggaacgtcaatctt
gactctgaaatccttgtttctttcttggacagcgttccctcgcccaccgcgatgcctgga
gggccaccggcagcgaagcggagacggactagccgaagcgaaatggcccgagtcgaactc
tcttctcaagatgacgttcaaaggcttcttcgaagactcacattggtactcgaattggtc
gaaggatctaatccaggacagcatccagagcttttcaagagccttttcggaatctttgct
gaaatgcagccacttaagcagcagtcggaatctgaattggtttacctgcagagtatcatt
ctcgggtcgttaagcccaattgttaggacactcatggagatgccagacactgccgattac
cagtcagcagtgcgcgcagaccttttgatcgactgcattcgacactcctccagcccgcaa
gtgcagaatagtgccctgctcttgatttcgaaccttgcttcatgggttcctgatctgatt
ctgcacaaccttatgcctatcttcactttcatcggatctactctgcttcgacagcatgat
gactactcagctcaagtcgttgataaaacaatctcccgcgtcgtaccgcaactggctgct
tcgcttcgctcgaaacacagggacttcattgctggagtttcggacttgctgctgagtttc
actgcggcgtttgaacacattcccttacacagaaggatgaagctgtttgcacagttggct
cgcacattgggccccgaagactctctcccggctattgttgctttgctcgccgaccggtac
cacagcaaggagcaacgaaggttctgcgcagacttgttgctttacttcgatcctatcaac
accttggtcaccttcaagggttaccttgatcttctcaccgatgccaccggaccgaaacca
caagtcgcggagacactctttgggctgaaggagaagacaaaggagaataagttcgattcg
ggaattcaaagcatgcttacatgcttgaccgatctggccctagacgacaaggtaaaagca
cacgtcaccagagcgtaccgaaagaaggacgacccagaaaggccacgaaggatctttgca
gacattatcgaaaccaccatccagctctccaagaaactggcgtcaaactcgaagacgtac
gcagcatgcagccgtgttctcgccagttgcttggatcttttgccgacgaccgatctcatc
aagtctgctgagttgctcctctctagcacagactctcatgtacaggtcgctgcagtcaag
tcagtcgagcttcgagcaggtactgccaagcagaatgaccgcaagtctgtggaagcactc
atctccttcttgcctagcgttcaaacgcttctgcaacagacatctgagatggatgcgaag
atggtctcggtcagttgcatcgaccgcatcatcgagcgcttcggcaagaaggatgtatct
gctgtatcatcagtggctcaaaccattgccggtcctgaatcactatcaagcaatgacgac
agaatccgcatcttgtctttgatctgtctaacttctgtcatcgacgttcttgaggatgaa
gccatctcgctactacctacaatcgttcccattgcgtttgagtacctgtcaaatgcgatt
gatgaagagaaggctggtcttcacaatgctgtattcaccttgcttgcgaacattgtcgac
cgtctgggatacatgttctcgcgggagtacttagatactgctttgcggttgtctcaacgt
tctgctgctgccgaccttgaggatgcttgcgatgaaacccgcgctagcttctaccagagt
gtatcgcagcatctcagtggacaagaagtattttcttctatcaagacgacatggtcaaat
gccgcctcccaaggcttcgacgccttgttcgaacagcttcaacttctgcagtccacaatc
aatgctcagaccaaggccaaactcgtcaaggcgagctcgccgctattcagcttgttcctc
caaacattccgtatgcgggacactctccaatcggagactgaagaagagattgatgaggag
gagactgagcaactcgaggccacgctgattgaatcggtcattgcgatggttctcaagctt
agtgacgccacattccgacccttcttcgtgcaacttatagatcaagaaggcccattacca
gccaagcctgaacgcgctatcaccttctacaagttcctcgctgctttcttcgacaaattt
aagtccctcgttacaagctactcgagctacataatcgagcctaccgccaaaatcctcacc
cacctcgccaaaaacgacacggaagtcgccactcgcactgccgtcctctctgcccttcaa
aagtcgttccagcacgaccaagacggcttctggcaagcaccctcccactttggcaccatc
atgccacctctcctttccctcctctccctcccctcggcctcatcttccaccccggaaaac
aacaccaacaacgtcatccccaccattaccgatctcgccgccgcctcctcatctagcatg
gagaatcaccgcgagatgaacactaccttgctcaagaacatgcgaagcgaggaccgaaac
acgcgcttggcgactgtgctttgcgagcagagtcttacgcgaaggttgggcgaggagtgg
ctgggtttgttgcccgagatgctaccgtttattagtgagctcatggaggatgacgatgag
attgttgagcgggagtgccagcgatggaagaatgggatggaggagattcttggggagagt
ctggaaggcatgttgcagtag
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integrated database retrieval system