Bipolaris zeicola: COCCADRAFT_2071 Help Entry COCCADRAFT_2071   CDS       T03110                                  Name (RefSeq) hypothetical protein   KO K20103   ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] Organism bze  Bipolaris zeicola Brite KEGG Orthology (KO) [BR:bze00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bze03019]     COCCADRAFT_2071 Enzymes [BR:bze01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      COCCADRAFT_2071 Messenger RNA biogenesis [BR:bze03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      COCCADRAFT_2071 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD PIN-like_DDX60 ResIII Helicase_C RHH_9 HPD Motif Other DBs NCBI-GeneID:  19144949 NCBI-ProteinID:  XP_007708714 JGI:  2071 UniProt:  W6YBQ8 LinkDB All DBs Position Unknown AA seq 1789 aa AA seqDB search MAANEQDTTEQILQWYSNLYSRRVDLVGDFAGSERFLVHGESLLLQCFSDPHLDFDPGYQ LLHASYTVEKYLQGLLSRSCNFHIAFFDEHQEFCVPQDASPAVSEKYLLARAAIIRHLRV NLPDAVPETEVHTFPSVSSVEFSEYLRATDIYFVLCHDGASFTDIRKRMLRHKDLGSLKD EDPSVKGRHQSYKSSFRTFIYSMMQRGYSAALVNGLEWQDTKVVTTVLEHARSLTLDVSS ANHHPERNVTDIVDLSHMRGFLQTIRESCDQLLTEREYLTVLVASKLSASNANLSSILLR QAAALSELALSERILNHQEIPEEVNNFILEFCHEARRFINSPAWAEAFAGHPDCDLADLI DGRLLAFYACKASPKPNEHFEVLLKATKALNNLDIPLQPSTSPAAEGSPETSSDDESFTY KVLPFSNDVFDPHLAPIHLDVARSSGKPDPTSATIFREVTHWHSQKSLNQKAKVVVEKDP KIAKKALRRNQFFMAEMTSYAASLTNAVGKVLDPETITLGDKAKPAPSNTENKRPKQVQR QSTKNINASKQAMLDSIAASSKRKDEENAKQWYQAWTVSCAGFEKQVDLASRYNKARQYL ADRSEAQRQVIGADVRIYMLNVLLEMWVRYCRDNAKDKGLYVAALLFDTARTLCNHETVT KTIAICLKATIDRLKLPKLQVPSAQGDRKLPFKFALEDTLVSDLALTLSPEEFQLLHCGP YFDRTIDSAPDSRVPFEPDAWQRRVLDEIDARRSLLVIAPTSAGKTFISFYAMKQVLEAN NEDVLVYVAPTKALVNQIAAEIQARFSKNYKYSQSVWGIHTRDYRINNPTGCQILVTVPH ILQIMLLAPTNARGWSERVKWIIFDEVHCIGQAEDGLVWEQLLLMAPCPIIALSATIGNA ESFNDWLSASQKAAGNELVMVQHPHRYSDLRKFVYTPPPKRDPASYLPLPANRSFAQLGL DEHADFAFLHPVASLINRSRGLPSDLSLEARDCLTLWQTMCKHQTDKYPVDKSLDPSKIL PTIIKKADIIKWQDGLKKILTAWMADEASPFEKVRSDLSSSINRIQEASPTDEVKEDSTD NNGEVDELGMEINHDISSILPLLADLQQQDALPGIIFNYDRAICEKMCRTLMKQLVDAEI AWKETSPKWKIKLQQWEDWKKEVQRREKQGLRGDASKGMTKQDQMKEAASVEVSAFASFD PNKPLDGFHFADHKKLSQEEFAVHAKELRYRGVEEWLIDGLMRGIGVHHAGMNRKYRYCV EMLFRKGYLRVVIATGTLALGINMPCKTVVFSGDSVFLTALNFRQAAGRAGRRGFDMLGN VVFHGVALSKIHKLISSRLPDLNGHFPITTTLVLRLFTLLHSSGNAPFAVRCVNALLSQP RLYLGGEDAKMTVLHHLRFSIEYLRRQYLLDAQGTPLNFAGAVSHLYFTENSSFAFHALL KDGYFHELCAKIDTNREQVLRELMLTMSHLFGRRYCRQADEEYVQEVVKKSPSIVFLPAM PETATNVLRRHNKTTLDIFTAYVRTFVDQHVQHPDNTLPLTEVTAGSKTPSSGVTQPQNI KARSTFVALSGHDDKFESLHDLCSTSRSGVFLEEAVVPHVGLYPEDSELPLNAYLYDFFQ HGDVEALIKANKIRRGDVWFVLNDLSMTLATITTSLSSFLGLATESDLDFIDVRGGGDDE EENREDKMLPSDTATEASATTAGSSNKGAFKQEVTIQPKKKAKKKVEESWEDEMGSEEEE SEVEESWDAEEDEDKEPPAWEEGEGLLNVLKAFKALKEEFDMKFRAMWA NT seq 5370 nt NT seq  +upstreamnt  +downstreamnt atggccgccaatgagcaggataccacggagcagattctccaatggtactccaatctctac agtcgccgggtcgacctggtaggcgacttcgcagggagcgagagatttctcgtacacggc gaatcactcctactccagtgttttagcgacccacatctcgacttcgacccaggctaccaa ttactacacgcctcgtacactgttgagaaatatctgcagggcctcctgtcccgcagctgc aacttccacatcgctttctttgacgagcatcaagaattctgtgtgcctcaagatgcctct cccgccgttagcgagaagtatctgcttgcacgagcagccatcattcgtcacctcagggtc aatctgccagacgctgtcccagagactgaagtccacactttcccttcagtttcctcagtc gagttttcagaatacctacgtgctaccgatatctactttgtgctctgtcacgatggagct tctttcacagacatccgcaagaggatgttgcgacacaaggacctcggctctctcaaggat gaggacccaagtgtaaagggccgtcatcaaagctacaagtcatcatttcgcacttttatc tatagcatgatgcagcgcggctacagcgctgcactcgtgaatgggcttgagtggcaggac acaaaggtggtcacaacagtcttggagcacgcacgttccttgaccctagacgtctcatca gcaaatcatcatcctgagaggaatgtcactgacattgtcgacctttcccacatgcgtgga ttcctacaaacaatcagggaatcatgtgatcagcttctgactgagcgtgagtatctgaca gtgcttgtcgcttcgaagctttcagcctcaaacgcgaatctgtcatctattctactacga caggcagcagccctgtcagagctggctttgtcggagcgcatattgaatcatcaagaaatt cctgaggaggtcaacaacttcattctagagttttgtcatgaagcgcgcaggttcatcaac agtccggcatgggcagaagctttcgccggtcatccagattgtgacttagctgaccttatt gacgggcgattgctcgctttttatgcctgcaaggcttcgccaaagcccaatgagcacttt gaggtccttctcaaagccacaaaagctcttaacaatcttgatatcccactgcaaccaagc acgtctcctgctgcagaaggctcacccgagaccagcagtgatgacgaaagcttcacatac aaggttcttcccttctcgaacgacgtcttcgaccctcacctagccccaattcaccttgac gtagctcggtcgagtggaaaaccagacccgacatcggctaccatctttcgtgaagtcaca cattggcacagccaaaagtctttgaatcaaaaggcgaaagtggtcgtagaaaaagaccca aagattgcgaagaaagcacttcgccggaatcaatttttcatggctgagatgacttcgtac gctgccagtctgacgaatgctgttggtaaagttctagacccagagacaattaccctcggc gacaaggcaaagcctgcgccatcgaacacggaaaacaaaagaccaaaacaagtgcagaga caaagcaccaagaacatcaatgcctcaaaacaagccatgcttgacagtattgcagcaagc tctaagcgcaaagatgaagagaatgcaaagcaatggtatcaggcttggacggtttcttgc gcaggattcgaaaagcaggttgacctggcgtcgcggtacaacaaagccagacaatatttg gcggaccgcagcgaggctcagcgtcaggttattggtgcagatgtgcgcatctacatgcta aacgttctcctagagatgtgggtgcgttactgccgtgacaacgcgaaggataagggtctg tatgttgcagcactcttattcgatactgcacggactctctgtaaccacgagactgttacc aagaccattgcgatatgcctcaaagctactatcgatcgattgaagttgccgaagcttcag gtgccgtcagctcaaggcgatcggaagctgccctttaaatttgcactggaagacacgtta gtgtccgatcttgctttgacgctgtccccagaagagtttcagcttctccattgtgggcct tactttgataggacgatcgactctgctccagactctcgtgtaccgttcgagccagacgca tggcaacgacgggtactagatgagatcgatgctcggcgaagcttgcttgtcattgcgcca acttcggctggtaaaaccttcatatcattttacgccatgaagcaagtcttggaagccaac aatgaggatgttctggtttatgttgcaccaacgaaagcacttgtcaaccagatcgctgcc gaaattcaagctcgattttcgaagaattacaagtacagtcaatctgtatggggtattcac acaagagattaccgtatcaacaatcccacgggatgccagattctggtaacagtaccccat attttgcaaattatgctgttggcgcccaccaatgccaggggttggtctgaaagagtgaaa tggattatatttgatgaagtccactgtattggacaagccgaagatggactggtttgggag caattgctactcatggctccttgccctatcatcgctctttctgcgacaattggcaatgca gaatctttcaacgactggctctcagctagtcaaaaggctgccggcaatgagcttgtgatg gtacaacatccgcacagatattctgatcttcgcaagtttgtctatacgccgcctccaaag cgtgacccagcgagctacttgcctcttccggctaaccggtcatttgctcagctcggtctc gatgagcatgcggattttgcattcctgcatcctgttgccagcttgataaacaggagccga ggtcttcccagcgatctatctctcgaagcccgggactgcctgactctgtggcagactatg tgcaaacatcaaactgataagtaccctgtcgacaagtcactcgatccctctaaaattctc cctactatcatcaagaaggcagatatcatcaagtggcaagatggcctcaaaaaaattctc actgcttggatggcggatgaggcatcgcctttcgagaaggtgcgcagtgacctcagcagt tccatcaaccgtattcaggaagcatcgcccaccgatgaagttaaggaagacagtaccgac aacaacggagaagtggacgagctaggaatggagatcaaccatgacatttccagcatacta ccactgctagccgatctgcagcaacaagatgcactcccgggtatcatcttcaactatgac cgtgcgatttgcgagaagatgtgccgaacactcatgaagcaacttgtagatgccgaaatt gcctggaaagagacaagccccaagtggaaaatcaagctgcaacaatgggaagactggaag aaagaggtgcagagacgagagaagcagggtctccgtggagatgcttccaagggcatgacc aagcaagatcaaatgaaggaggcggctagcgttgaagttagcgcttttgcctcatttgat ccgaataaacctcttgatggatttcactttgccgatcataagaagttgtcccaggaggag tttgctgtacacgcaaaggagctgcgttaccgtggtgtagaagagtggctgattgatggc ctcatgcgtggaattggagtccaccacgctggtatgaaccgaaagtaccggtactgtgtc gaaatgcttttccgcaagggctatctgcgggtggtcatcgccactggtaccttggccttg ggtattaacatgccgtgtaagactgtggtcttctcaggtgactctgtcttcttgacagct ctcaacttccgccaggcagccggtcgtgccggtcgtcgtggtttcgacatgctcggaaac gtcgtcttccatggcgtggcactcagcaagattcacaagctcatcagctcccgactccct gacctcaatggccacttccctataaccactactttggttttgcggttgttcactttgctg cactcgtcagggaatgcgccttttgctgtccgttgtgtcaacgccctgctgtcacaaccg cgattgtacctgggcggcgaggatgcgaagatgacagtgctccaccatttgcgattctct atcgagtatctccgcaggcagtatcttcttgatgcacagggtacccccctcaactttgcg ggcgctgtctcacatctctattttacggagaactcatcatttgcattccatgcgctactg aaagacggatactttcatgagctgtgcgccaagatcgacacaaacagggagcaggttcta cgtgagctcatgctcacaatgtcgcacttatttggccgaaggtattgtcgacaggcagat gaagagtacgtccaggaagtggtcaagaagagcccgtcaattgtgttcctaccggcaatg ccagagacggccaccaacgtcttgcgccgtcacaacaagactacgctcgatatattcact gcttatgtgcgtacattcgtcgaccagcatgtacaacacccagacaacactctgcccttg accgaagtcaccgccggcagcaagaccccaagttctggtgtgacccagccccaaaacatc aaggctcgctcaacctttgtcgccttgtctggccacgacgacaaattcgaatctctgcac gacctctgctccaccagccgttctggcgtcttcctcgaagaagccgtcgttccccacgtc ggtctctacccggaagactctgaactccctctaaacgcctacctctacgacttcttccaa cacggcgacgtcgaagccctgatcaaagccaacaagatccgacgcggcgacgtctggttt gtcctcaacgacctcagcatgaccctcgccaccatcaccaccagtctctccagcttcctg ggtctcgccaccgaatccgacctcgacttcatcgacgtccgcggcggcggtgacgacgaa gaggaaaaccgcgaagacaaaatgctacccagtgatacggccacggaagccagtgccacc actgctggctcctcgaacaagggcgcgttcaagcaggaagttactatccagccgaagaag aaggccaagaagaaggtcgaggagagctgggaggatgagatggggagtgaggaggaggag tctgaggttgaggagagttgggatgctgaggaggatgaggacaaggaaccccctgcgtgg gaggaaggagagggtttgctgaatgtgctcaaggcgtttaaggcattgaaggaggagttt gatatgaagtttagggctatgtgggcttag

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