Bipolaris zeicola: COCCADRAFT_2243
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Entry
COCCADRAFT_2243 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_2243
Enzymes [BR:
bze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COCCADRAFT_2243
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Meiosis-specific proteins
Others
COCCADRAFT_2243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Sec63
WHD_SNRNP200
ResIII
Helicase_C
HHH_5
AAA_30
Motif
Other DBs
NCBI-GeneID:
19145193
NCBI-ProteinID:
XP_007708908
JGI:
2243
UniProt:
W6YMP7
LinkDB
All DBs
Position
Unknown
AA seq
1574 aa
AA seq
DB search
MGERFYHQEQPGSPRRVSHYNILQPQIKQPARLTAPRDRYRVTRYDDPMYDTVEDDHANG
QGSQLDSFDERLLQQSYPDRLPQVTHGNGRLSFAPAPSQPSYGGRGNYINRDQGRFAYNS
AQLQDSSSDPQIGQSSSPAFKASQRCIEYASASTAKYGSGTQTSRDTRRHTIGLEAHGYQ
QYHGQIVSPKCQEHVLGELPSLNPDGAQESPCHRGQDISELPEALVTAPHAPPVCQGIRL
VPVATLPDRLRTIFPYPTFNAVQSKCFNTVFRSDNNFVLASPTGSGKTVILELGICRAFA
TNSTGQYKIVYQAPTKALCSERQRDWETKFNKIGLKCAELTGDSDISDLRHVQSANIIIT
TPEKWDSVTRKWRDHEKLMRLIRVFLIDEVHILKESRGATLEAVVSRMKSIGTNVRFVAL
SATVPNFNDIATWLGKSPIDPNTPAANESFGEEFRPVKLRKHVCGYMSNANNEFGFEKVL
DSKITDVIATYSEGKPIMVFCATRNSTLQTAKLIASWWSSRMDSDRFWTAPSKHIRLLNK
DLRDTVASGVAFHHAGLDIEDRMQIERSFIAGEISVICCTSTLAVGVNLPCHLVIVKNTM
AWGPAGHQEYSDLEMMQMLGRAGRPQFDDTAVAVIMTRQTKVRRYEKMVTGEELIESKLH
LNLIDHMNAEIGLGTIYDLPSARRWLKGTFLFVRLQQNPAYYKLEGSRTGQSIEEQVDDI
CFRDVNLLQQSNLVSSEERFTCTEFGHAMSRYYIHFETMKLFMGLEAKSSPSEILSAIAQ
AKEYSNIRFRQGEKTFYKMLNKSPSIRWTIPVNLDLPAQKISLIIQSVLGSADISWDGDM
AKHRSQYATEMMMVFRNIGSLIRCIIDCQIVLGDAISIHSALMLERSFGAKAWDDSPLQM
KQIETLGVVAVRKLVNAGIKSIEDLEGCEPHRIEAVVGRNPPYGLQILEKIKCFPKLRVS
LQEQPSTIVKTLEGVKMQIKADIGFMNERPPLRFNNKLIYVCLLVEASDGRKIHFARISG
SKLCTGQSLSIPVLLTSYDQSINCHVMCDAGSMRSVTLRPQIPSSMHPILKSSGLDSSAP
NQSNMSKRRTENAKESWKASNTGDDFGDDGLDDDTLVQAACGDLTFDNIDAYPDPLAEKV
ERNHSNASSSNKQDVGKILSLKALPEAVVKGTAQDPVQLANGRWACNHPCKDREACKHLC
CKNGMDKPPKKKLMAKLSQLGEPQMQSQQKLPTPKVKTIQTMLQLAALKRKASIQIEELD
LTQQEKRNKVDRALDDLGAQSEIQKSTKGSNLSSATQSISHMKPRHCYHQGDAGRVSSSE
PLVTEPLLDSSDYGNIQFDDALDFLDPPQQPSVLSDCNNQTEYHDLVDCEAIALGISPES
EMFYDDDSLLGDVLVGLADSHSLQGNNEGDFDSMKGVKGFLHCANKESSEEARHLKGDKI
ADAEGFTNNVLPRTAYTEGHYQSYESPAERQGSHPDRLISTTRIKRTFPDAAVNFIDDNK
TGKQAPGKSGLTLAQLKKYQQSSTTKELPEHLEKAVDETACPVSPEEKIVPDAFKDLEPW
LLEEFGDIVEVVDE
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagcgcttctatcaccaagaacagccgggtagcccgcgacgtgtatcgcattac
aacatccttcaaccccaaatcaagcagccggcccgtctgactgctccccgagatcgctat
cgtgtgacccgatacgatgaccccatgtacgacaccgttgaagacgaccatgccaacggc
caaggatctcagctcgattctttcgatgagagactgcttcagcagtcgtatccagatcgg
ctgccgcaagtcacgcacggtaatggaagattgtcgtttgcgcccgctccatcacaaccc
tcgtatggtggccgtggtaactatataaatcgagatcagggtcgatttgcctacaattct
gcacaactccaagattcgagttccgaccctcaaattggccagtcctccagcccagcattc
aaagcaagccagcgctgcatagagtacgccagcgcctccactgcaaaatacggctcaggg
acccagacgtccagggatacccgacggcacaccatagggcttgaagcacacggatatcag
caatatcatggacaaattgtgtctcccaaatgtcaagaacatgtccttggagaactgccg
tccctgaatccggatggagcccaagaatctccttgtcatcggggacaagatatcagcgaa
ttaccagaagctctcgtgactgcaccacatgctcctcccgtgtgccagggcatccgtctc
gtcccggtcgcaactttgccagatcggcttcggacaatattcccttacccaacgttcaat
gcagtacagtccaagtgtttcaatacggtcttccgttctgataacaactttgttcttgca
tctccaacaggaagtggtaaaacagtgatcctcgagcttggcatatgccgagcatttgct
accaattcaactggtcaatacaagattgtctatcaggctcctaccaaggctttgtgctca
gaaagacaacgtgactgggaaacaaagttcaacaagattggcctaaagtgtgccgagctc
actggcgatagcgatatatcggacctccgacatgtccaatccgccaacataatcattacg
acgcctgagaaatgggatagtgtgactagaaagtggagagatcacgaaaagctgatgaga
ctcatcagagtttttctcattgatgaagtacacatactcaaagagagccgtggcgctacc
cttgaggcagtcgtgtctcgcatgaagtctattggaacaaatgttcgctttgtggcactg
tcagccacagtacctaacttcaatgacatcgcaacttggcttggcaaaagcccaatagac
ccaaacaccccggctgcgaacgagagttttggcgaagaattccgaccagtgaaactgcga
aagcatgtttgcggctacatgtccaacgccaacaacgaatttggatttgagaaagtgctt
gatagcaagataaccgatgtcatagctacttactctgaaggtaaaccgataatggtgttt
tgcgctaccagaaactccacgcttcaaacggcgaagctgatcgcaagctggtggtcttca
aggatggacagtgatcgcttctggacagcaccatcaaaacacatccgccttttgaataaa
gaccttagggatacagtcgcttcaggtgtcgccttccatcatgctggtctcgacatagaa
gatcggatgcaaattgagagatccttcatcgccggcgagatcagtgtcatttgttgtacc
tctacactcgctgttggagtcaatctgccttgccatcttgtaattgtcaagaacacaatg
gcttgggggccagcaggacatcaggaatactccgatttagagatgatgcagatgcttggt
cgcgcgggccgcccgcagtttgacgacactgctgtagctgtcatcatgacgcgccaaaca
aaggtccgaagatacgaaaagatggttactggtgaagaacttatagaaagcaagcttcac
cttaacttgatcgatcacatgaatgctgaaataggccttggaacaatttatgatttgccc
tcggcaagaagatggctcaaaggtacctttctctttgttcgactccagcagaaccccgcg
tattacaaacttgaggggtccagaaccgggcagagtattgaagagcaagtggatgatatc
tgttttcgcgatgtcaacctcctgcaacagagcaatctagtctctagcgaagagcgtttc
acatgcaccgagtttggacatgctatgtcacggtactacattcattttgagacaatgaag
ctgttcatgggactcgaggcaaagtcctcaccctctgagattctctcggctattgcacaa
gctaaggaatactctaacatacgtttccgccagggcgagaagacattctacaaaatgttg
aacaaatcaccatcaatccgctggactattcccgtgaatttggatctcccagcgcagaag
atttcgcttatcatccaatctgtcctggggtctgctgatatctcatgggacggcgacatg
gccaaacacagatcacagtacgcaacagaaatgatgatggtgttcagaaacataggcagt
ctcattcgatgcattattgactgccaaattgtgctgggcgacgctattagtattcacagt
gctttgatgctcgagcgaagttttggcgcaaaggcttgggacgacagcccgctccaaatg
aagcagattgagactctaggcgtggttgctgtaagaaagcttgtcaatgcgggtatcaaa
tccatagaagatctcgagggttgcgaaccacataggatcgaagctgtggttggaagaaac
ccaccttatggcctgcagattcttgagaagatcaagtgctttccaaagcttcgtgtttcg
cttcaagaacagccttccacgattgttaaaacgttggaaggagtcaaaatgcagatcaag
gcagacattggcttcatgaatgagcgcccaccactgcgcttcaacaacaagctcatctat
gtttgccttttggtggaagcatcagatggacgcaagatacactttgcccgcatcagtggt
tctaaactttgtactggccaaagtctttccattccagtcctcttaaccagttacgaccaa
tccatcaactgtcatgtcatgtgtgatgctggcagtatgcgcagcgtcactttgagacct
cagataccctcatccatgcatccaatcttgaaatcttctggcttagattcatcggcccca
aatcagtccaatatgtcaaagcgacgcacggagaatgcgaaagaaagttggaaagcgtct
aataccggtgatgatttcggtgatgacggactcgacgatgatacactcgtgcaagctgct
tgtggagacctcacattcgacaatatcgatgcatatcccgatccgctcgcagagaaagtt
gagcgcaaccactccaacgctagttcgagcaataaacaggatgttggaaagatcctaagc
cttaaagcgctgcccgaagctgtcgttaagggcactgctcaggatccagtgcagcttgca
aatggtagatgggcttgtaaccacccctgcaaagaccgcgaagcgtgcaagcacttgtgt
tgtaaaaacggaatggacaagccgccaaagaagaagcttatggccaagctctctcagcta
ggcgagccccaaatgcagtcgcaacagaaactcccgactccaaaagtcaaaacaattcaa
actatgctccagcttgcagcacttaaaagaaaagcttcgatccaaattgaagagttggat
cttactcagcaagaaaagaggaacaaagtagaccgagctctagatgacctgggggcacaa
agcgagattcagaagagtacgaagggtagcaatctatcttctgcaactcaatcgatttcg
catatgaagccaaggcactgctatcaccagggtgatgcaggcagagtctcctcctcggaa
cctttagtcacagaaccactccttgattcaagcgactacggcaacatccagtttgacgat
gctcttgattttcttgatcctccacaacaacccagtgtgctatccgactgcaataatcaa
acagagtaccatgatcttgtagattgcgaggcgattgccttaggtatctctccagagtcg
gaaatgttctatgatgatgactcactactcggagacgtactggttggcctagctgactcg
catagcctgcaaggcaacaatgaaggcgattttgattcaatgaaaggtgtgaagggtttt
ctccactgcgcaaacaaagaaagctcggaagaggcgcggcatttgaaaggcgataaaatt
gcagacgccgagggattcacaaacaatgttttgccaaggactgcttatactgaaggccac
tatcaatcctatgagtcgccagcggagagacaaggctctcaccccgacagactcataagt
actacgagaatcaaacgcacatttccagatgcggcggtgaactttatcgacgataacaag
accggcaagcaagcccccggaaagagtggccttacccttgcacagttgaagaaataccag
caatcatcaactaccaaagaactcccggagcacttggaaaaagctgttgacgagactgcc
tgcccagtctcaccagaggagaagatagttcccgacgctttcaaagatctagagccatgg
cttcttgaagaattcggcgacatagtagaagttgttgatgaatga
DBGET
integrated database retrieval system