Bipolaris zeicola: COCCADRAFT_2284
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Entry
COCCADRAFT_2284 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bze
Bipolaris zeicola
Pathway
bze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCCADRAFT_2284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_2284
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_2284
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
COCCADRAFT_2284
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
COCCADRAFT_2284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
19145289
NCBI-ProteinID:
XP_007708992
JGI:
2284
UniProt:
W6YG12
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MTEVMTSVAAPMSEEKSAEARPPQYTFKFSEFLRREYRFGLNPDRPTCKAYLQGHCPDGS
KCPNKHNVSSSYNNLVCKHWLRGLCKKGETCEFLHEYNLRRMPECSYYARTQTCSNGDDC
LYLHLDPDAKRPSCPHYDRGFCPLGPHCALKHNKKDKLCPFYLCGFCPEGKGCKYGAHPR
YPTDLKKPEVRVEKSAEELEAEKLEREREMMKREEEERERDERNGHQGGRGFRGNWDRKK
RGGRRGRGGRGRGEF
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagtcatgacatccgtagcggctcccatgtcagaagaaaagtccgccgaggcc
cggccgccccaatatacctttaaattcagcgagtttcttagacgtgaatatcgatttggc
ctaaaccccgatcgcccaacctgcaaagcatacctccaaggccactgtccagacggcagc
aaatgccccaacaagcacaatgtctcttcgtcctacaacaatctagtatgcaaacactgg
ctccgcggcctctgcaaaaaaggcgaaacctgcgaattcctccacgaatacaacctccgc
cgcatgcccgaatgctcctactacgcacgtacacaaacctgctcaaacggcgatgactgc
ctgtacctgcacctggaccccgatgccaagcgcccttcatgcccacactacgaccgcggc
ttctgcccccttggcccacactgcgcgctgaagcacaacaagaaagacaagctgtgtccc
ttttacctgtgcgggttttgtccagagggcaagggctgcaagtacggtgcgcacccgcgg
taccccactgatcttaagaagccagaggtgcgtgtggagaagagtgctgaggagcttgag
gcggagaagttggagcgcgagagggagatgatgaagagggaagaggaggagagggagagg
gatgagaggaatgggcatcagggaggacgtgggtttaggggtaattgggatcgtaagaag
cgtggaggacgacggggtaggggtggtaggggtcgtggagagttttaa
DBGET
integrated database retrieval system