Bipolaris zeicola: COCCADRAFT_23265
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Entry
COCCADRAFT_23265 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
bze
Bipolaris zeicola
Pathway
bze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCCADRAFT_23265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_23265
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCCADRAFT_23265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
19145375
NCBI-ProteinID:
XP_007708630
JGI:
23265
UniProt:
W6YBV0
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MSLFGNLGASQPASTGTSGGGLFGTAGGASGGTTSSLFGNLGAGTSNAQSGTTQATSSGG
LGGGLFGAAKSTATTTPSLFAGAASTTQPQQQSQPQTGGFSLFSNTAAQPTTNNTQQTGG
LGQTSLFNTTTQQQTQQPQQPQQQGASLAQANAGSGRSAHFDHLLERGRKRNAGENGTSN
FDELPSLQLGLGDIARKVRNLGSGGPSADQVQDRAQDRAAHYLLSASGVKMGSTLRDLNQ
FSSQAGLATPGQVQSLFDNDVDGYISNLHSQSTLALIQEGLEQSKRDFDTFLEDNVQIEW
DKQRQRIYEHFGLGRQSEDMAASQSGFGSTARGAFGRATARKGRSMGPNGASVNGRSTFG
ASAAGPPVLGASQSVLGGRDVSDKSVMGGQVGLQDRYARDKQEKFMDEVKRLNEARLREE
SFSVLHSFSSVEKAAGTEYSDHFINAYGALVSITGEKTEAEASNPGSNQPKERSFAKDYL
DDQPNSVASVRMRKRILDGSRKYLENKFLEQVDEVLRKNPSEALVGGVPSMLNKIRGFVR
AKAAFKELGADTELFQRIGEAGDEFPWIIIFFLLRGGLLTEAAEYVREKRNFFQNTDRNF
QSAITQYATDPDRRLSPDTQQKVGHTHAQRTRLKTPEDPYRMACYKIVGRCDMSKRNLEP
IKETMDDWVWLQFNLAREGNRAEENAGEIFGLEELRTTIKDIGQRHFMNDTAESAGGYGV
YFYLATLAGLFEPAVNYLYTHNYVSAVHFAIALDYYGLLRVSDWTTAGGEILTYTTRQQP
QLNFGRVVGYYTSDFRAARADAAADYLVLICMNADLPGEAGRQQADLCHEALRELVLETR
EFSTLLGDVKSNGQTTPGLIQERVPLLKLDGETGLLNTITSEAARMADDNGRINDAILLC
HLAGEYDSVVTILNRALAEALSVELGQEPLRLEPLKPRLNAGESQQQQQQSDASSSLSML
GTDDPVELAQKVLALYNANSLWWKKVSQVNREAVGILFQLNNAKKVIEAGDYMAALGQIE
NLRILPLSAGGNVSDIRAAANSFNSYPQEISRNIGNVLLWCIGCCSRHREHLLSGQFEDQ
MRKVLADQLLQKAKDLMVFAGLIKYKLPPRVFETLAREGLEVGAF
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgttcggcaatcttggagcctcgcagcctgcttctactggtacctcgggcgga
ggcttgtttggaacagcaggaggcgcatcaggcggcacgacatcaagcttgtttggcaat
ctgggcgcaggcacatccaatgcgcaatctggcacaacgcaagcaacaagcagtggaggt
ctaggcggcggtctgttcggtgcagcaaagtcgactgctaccacgacaccctcgctgttc
gctggcgcagcatcgacaacgcaaccccagcagcaatcgcaaccacaaacgggcggcttc
tcgctgttcagcaacacggcggcgcaaccgactaccaacaacacgcaacaaacaggcggt
cttggtcagacctcgcttttcaataccacgacccagcagcagacccagcaaccccagcag
ccccagcaacagggcgcgtcgctcgcccaggcaaacgcaggctccggccgctccgctcat
ttcgatcatctcctggaacggggacgtaagcgcaatgctggcgagaatggcaccagcaac
tttgacgagctgccgtcgctccagttgggccttggcgacattgcacgcaaggtgcgaaac
ttgggttctggaggcccttcggcggatcaggtccaagatcgcgctcaagaccgcgctgcc
cactatctactctcagcttctggcgtgaagatgggcagcaccctccgagatctcaaccag
ttctcttcccaggcaggcctcgctacacctggccaggttcaaagtctcttcgacaacgac
gtggacggttacatctccaacttgcattcgcagtccaccttagccctcatccaagaagga
ttagagcagtccaagcgtgacttcgataccttcctggaggacaatgtgcagatcgaatgg
gataaacagcggcagaggatctacgagcactttggtctgggtagacagagcgaagacatg
gcagcctcgcagagcggctttggcagcacagctagaggggctttcggacgcgctacagca
cgcaagggtcgttccatgggccccaatggggcatcagtcaatggacgatcgacgtttgga
gcctccgctgctggaccacctgtcctgggtgcttctcaaagtgtgctaggtggccgagat
gtctctgataaatccgtcatgggcggacaagttggactccaagaccgatatgcacgagac
aaacaagagaaattcatggacgaggtcaagaggctcaatgaggcaaggctacgcgaagaa
tcgttctctgtgcttcactctttctctagtgtagagaaggctgctggcaccgagtactcg
gatcatttcatcaacgcttacggagcacttgtttctattactggtgagaagactgaagca
gaagcatccaacccaggctcaaaccagcccaaggagcggagcttcgccaaggactatctg
gacgaccagcccaactctgtcgcgagcgtacggatgcgcaagcgcatactagatggctct
cgtaagtatctagaaaacaagttcctggaacaggtagatgaggttttgcgaaagaatccg
tcggaagcgcttgttggcggtgttccgtccatgctcaacaagattcgtggatttgtcaga
gccaaagctgcgtttaaggagcttggtgcggataccgagttgttccagaggataggagag
gcaggagatgaattcccatggatcatcatcttcttcttgttaagaggtggccttttgacg
gaagctgccgagtatgtccgagagaagaggaacttctttcaaaacaccgatagaaacttt
caatcggcaatcacacagtatgctacggatcctgaccgtaggctgagcccggacactcaa
caaaaggtgggccacacacacgctcagaggactcgtttaaagacacccgaagatccttac
cgcatggcctgttacaagattgtaggccgatgtgacatgagcaagcgcaacctggagcct
atcaaggagaccatggacgactgggtgtggctacagttcaacttggctcgcgaaggcaac
agagccgaagaaaacgcgggtgaaattttcggcttggaagagctgcgaacgacgatcaag
gatattggccaacgccactttatgaacgacacagctgaatctgctggtggatacggagta
tacttctatcttgctacgcttgctggcttgttcgagcctgcggtcaattacctctatacg
cacaactatgtgtctgcggttcatttcgctattgctctggactactatgggctactacga
gtttcagattggacaacagctggaggcgagattttgacctacacaacacgacaacagccg
cagttgaactttggacgagtggttggatactacaccagtgacttccgggcggcccgagct
gatgctgcagctgactacttggtgttgatatgcatgaacgcagacctaccaggcgaagcg
ggcaggcagcaagcagacctttgccacgaggcactccgtgagcttgtccttgaaacacgc
gagttttccacattgctaggcgatgtcaaatcgaatgggcaaacaacgcctggtctcatt
caagaacgtgtgccattactgaaactcgacggcgaaacgggtctactcaatacaatcacg
agcgaagcggcaagaatggcagatgataatggacgcatcaacgatgccattttgctgtgc
cacttggccggcgagtatgacagcgtagtcaccattctcaaccgtgcgcttgctgaggct
ctttcggtagagcttggtcaagagccacttcgtctggaaccactcaagccacgcttgaat
gcaggcgagtcgcaacagcagcaacagcagtcggacgcgtcgtcgagcttgagcatgctt
ggaacagacgatcctgtggagcttgcccagaaggtcctggcactatacaatgcaaacagt
ctgtggtggaagaaggtttcgcaggtgaaccgtgaagcggtgggcatcctgttccagctt
aacaatgccaagaaggtgattgaagctggtgactacatggcagcacttgggcaaatcgag
aatctccgcatcctcccgttgtctgctggaggcaacgtcagcgatattcgggccgccgcc
aacagcttcaactcgtatcctcaggagatatcgcggaacattggcaatgtgctactatgg
tgcattggctgctgttcaagacaccgggagcatcttctttctggacagtttgaagaccag
atgcgtaaggtgctggcggatcagctgctgcaaaaggccaaggacctcatggtatttgct
gggctgatcaagtataagcttccgcccagggtgtttgagacgttggcgcgagagggtctg
gaagttggcgctttttga
DBGET
integrated database retrieval system