Bipolaris zeicola: COCCADRAFT_26247
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Entry
COCCADRAFT_26247 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K15560
protein NRD1
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_26247
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
COCCADRAFT_26247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrd1-Seb1_dom2
CID
RRM_1
Motif
Other DBs
NCBI-GeneID:
19145968
NCBI-ProteinID:
XP_007712234
JGI:
26247
UniProt:
W6YPT2
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MDELGTQLQSLQALKPPGVTPTKIKAITQLCVDNIQSHPVIVQKIAQQLQNSAVTHKLGV
LYVVDAVARQWVERAKQAGQTVSKNAVPGTYASGVQMMRDVLPAMMMNLIQSAPDTQKEK
ISKLIDIWERGQTFPHDMLASFKQQLNGGHNNVPLPVEPPKSNGIAPTFNGQTANPQPLA
PPPPAQPSQDTNALFAALAGISHQNIPTNAPPAAPHAFPFQQNVLLPPPPGFVPPPPAVT
TGQPGLPVPPAGMNELAGQILQAMSAGSIQPDQAIQVLNALATAQSGGLSMLPLQPPVAT
QTPPQGQSIVINGNQTDRYDQTDSKMRDRSRSPGFQHRRSPGDRSPPNPNRRESPTYGVY
DPNAGPEGNSQRFERGERGRSRGKQKGGRNDRSEYRQRSPPRRQPSPPRATAYGQSKYID
WDETLPRDNIRVLSRTLFVGGAGGTESEIRSIFSRFGRVQTCIVNQDKRHAFVKMLTRPD
ALAAKQGMDSLNDPVAQSKARQTRWGVGFGPRDCSDYQTGISVIPISRLTEADRKWALTA
EYGGTGGRALEGGMVIEEPDIEIGAGVSSKAISRRVPTDAPRGGRGGYGARGDHAGRSNS
NGRENLNERADAAPNNFGGARPGPENAAQHKFRKHDRGNANDPRHVSPRADQGVAVPPAV
PGFGFQLPGFS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactaggcacacaattgcaatccctccaggccctcaagccgcctggagtcaca
cccaccaagatcaaagccatcacgcaactgtgcgttgacaacattcagtcccaccccgtc
atcgtccagaagatcgctcagcagcttcagaacagcgccgtcacacataagctaggagtg
ctatacgtcgtagatgcagttgcccgccagtgggtggagagggctaagcaggccggccag
accgtgtccaagaatgccgtaccaggaacatatgcttcaggagtgcagatgatgcgagat
gtgctacccgccatgatgatgaatctcatccagtctgcaccagacactcaaaaggagaag
atttccaagcttatagacatctgggagcgtggccagacgtttccacacgacatgctagcc
tccttcaaacagcaactgaatggcggtcacaataacgttccattacctgtagagccaccc
aagagcaatggcatagccccaaccttcaacggacagactgctaacccacagccacttgcc
ccgccacctccggcgcaaccatcacaagacactaatgctctgtttgctgccctcgccggc
attagccaccagaatatacctactaatgctccacctgcagcacctcatgcgtttcctttc
caacaaaacgtattgctacctccacctcctggttttgtgcctccgccgcctgctgtaaca
acaggacagcccggtttgcctgtcccacccgctggaatgaatgaactcgcaggacagatt
ctacaggccatgagtgctggttcaatccaacccgatcaggcaatacaggttttgaacgca
ttagccacagctcagagtggtggactgtccatgttgcccttacaacctccagtggctaca
cagacacccccacaagggcagtcaattgtaatcaacggtaaccaaacagatcggtatgat
cagacagacagtaaaatgcgagaccgtagccgatcgccgggctttcaacatcgacgatcg
cctggggataggtctcctcccaaccccaatcgtcgggagagcccaacatatggtgtttac
gacccaaatgcaggccctgaaggcaattcgcaacgctttgagcgaggtgagcgcggccgt
agccgcggcaaacaaaaaggaggacgtaatgatcgtagtgaatatcggcaacgctcgcca
ccgcgacgacagccaagcccgcctagggcaacagcatatggccagtccaagtatattgat
tgggatgagacccttccacgcgataatatcagagtgcttagtcgtacattgtttgtaggc
ggtgctggcggaacagagagtgagattcggagcatcttttctcgctttggtagggtccaa
acgtgcattgttaaccaagataagcgacatgcctttgtcaagatgttgacccgccccgat
gctcttgctgccaagcagggcatggacagcttgaatgatcctgttgcacagtctaaagcg
cgccagacgcgatggggtgtcggatttggtcctcgtgattgcagtgactaccagacgggc
atcagtgtgattcccatttctcggcttaccgaggctgatcgtaaatgggcattgaccgct
gagtatggcggaactggcggtcgtgctctcgaaggtggcatggttattgaagagccggat
atcgagattggggccggtgtttcttccaaggccatcagccgacgtgtgccgaccgatgct
cctcgcggcgggcgtgggggctacggtgcccgtggagaccatgctggacgtagcaactct
aatggacgtgagaacttgaacgagcgcgccgatgcagcacccaacaactttggcggtgca
cgccccgggcctgagaacgctgcccaacacaagttccgcaagcacgaccgaggaaacgct
aatgatccccgccatgtgtcgcccagagctgatcagggtgttgcagttccgccggccgta
cctgggtttggtttccagctccccggcttttcatga
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