Bipolaris zeicola: COCCADRAFT_26351
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Entry
COCCADRAFT_26351 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
bze
Bipolaris zeicola
Pathway
bze03030
DNA replication
bze03420
Nucleotide excision repair
bze03430
Mismatch repair
bze03440
Homologous recombination
bze03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCCADRAFT_26351
03420 Nucleotide excision repair
COCCADRAFT_26351
03430 Mismatch repair
COCCADRAFT_26351
03440 Homologous recombination
COCCADRAFT_26351
03460 Fanconi anemia pathway
COCCADRAFT_26351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bze03000
]
COCCADRAFT_26351
03032 DNA replication proteins [BR:
bze03032
]
COCCADRAFT_26351
03400 DNA repair and recombination proteins [BR:
bze03400
]
COCCADRAFT_26351
Transcription factors [BR:
bze03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
COCCADRAFT_26351
DNA replication proteins [BR:
bze03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
COCCADRAFT_26351
DNA repair and recombination proteins [BR:
bze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
COCCADRAFT_26351
MMR (mismatch excision repair)
COCCADRAFT_26351
DSBR (double strand breaks repair)
HR (homologous recombination)
COCCADRAFT_26351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF4503
Motif
Other DBs
NCBI-GeneID:
19145987
NCBI-ProteinID:
XP_007712374
JGI:
26351
UniProt:
W6Y0Q1
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MAEGAITQGAIQSIFQPSGCFVEHPVLQCVQIKTMEPKAGEANPVQRFRVVLSDIRNFIQ
TMIATTANEIVTSGQLKKGSIVRLLKYNPQRVKDKNILIIMELEVLSQYGELDKIGQPEA
LDTKPADAQPAAIPGNNFYGSKPAPAPQPQRSLPTHQSNPGTSSHPHLYPIESLSPYAHK
WTIRARCTHKSDMKEWHNQKGTGKLFSVNLLDDTGEIRATAFTEVADKLFPVFEEGVVYY
ISAPCRVTLAKKNFSNLPNDYELQFERDTEVEKAEDQDNKPQIRFNFTKIGDLTSVEKDT
TIDTIGVLKEVAEVTTITSKNTNKDFSKRELTLADDSQTSVRLTIWGKTAESFDVPLESI
VAFKGVKVSDFGGRSLSLLSSGSMMVDPDIDEAHKLRGWFNAVGQSATFSTHQNMVSTTG
GSKNDAKPISAIIEEEAYLQDTPSYMSLRASVLYVKDSTFAYPACSTQGCNKKVIEENPG
SWWCEKCQAAFPEPNYRYVLSANVGDHTGTLWLSCFDEAGQTIVGVSANEAMKMKMDDEE
NGSRNFTNLMQEATCKTFNFRVRAKMETYQDQPKPRYQVMNIYPLNFAQEANKLAQLIKQ
YNMNEDSLFVS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggagcaatcacccaaggcgctatccagagcatctttcagccgagcggttgc
ttcgtggagcacccagtactgcaatgcgtgcagatcaagaccatggagcccaaggcgggc
gaggcaaatcccgtacagcgctttcgggttgtgttgagtgatattcggaactttattcag
accatgatcgccaccactgccaacgagattgtcacttctggtcagctcaagaagggatcg
attgtacgacttctcaagtacaatcctcaacgtgtcaaggataagaacatcctaatcatc
atggaactagaagttctttcgcagtacggcgaacttgacaagattgggcagcctgaggct
ctagataccaagcctgccgatgcgcagcctgccgctatccccggcaataatttctacgga
tcgaagcctgcgcctgccccgcaacctcagcgctcgctgcctactcatcagagtaaccct
gggacttcttcacaccctcatctttatcctatcgaatctctttcgccctacgcccacaag
tggaccattcgagcacgatgcacccacaagagcgacatgaaggaatggcacaaccagaag
ggaacgggcaaacttttcagcgtaaatttgctggatgacactggcgaaattcgagcgaca
gctttcaccgaagtcgctgataaactgttcccagtatttgaagagggtgttgtgtactac
atctctgcaccctgcagagtaacgcttgcgaagaaaaacttctcaaacttgcccaacgac
tatgagctgcagtttgagcgtgacactgaggtcgaaaaggcagaggatcaggacaacaag
ccacagattcgattcaacttcaccaagattggcgatcttacctcggttgaaaaggacaca
accatcgacacgattggtgtattgaaggaagttgctgaggttactacaataacttcaaag
aataccaacaaagacttcagcaagcgagaactgacactagccgatgacagtcaaacatct
gtgcgactcaccatctggggcaagactgcagagagcttcgatgtaccgctggagtcgatt
gttgctttcaagggagtaaaagtctccgactttggcggccgaagtctgagtctgttgagc
tccggttcaatgatggtcgatccagacattgatgaggctcacaagttacgaggatggttc
aatgctgttggacagagtgctaccttctctacgcatcagaacatggtgtctactactggc
ggttccaagaacgacgcaaagccaatttcggctatcatcgaggaagaggcctatctccaa
gataccccctcatacatgagccttcgtgcatcggtcctttacgtcaaagattcgactttc
gcatatcctgcgtgttcgacacaaggctgtaacaagaaagtcattgaagaaaaccctggg
tcttggtggtgtgagaagtgccaggctgctttccctgagcccaattaccgctatgtgctc
agcgccaacgttggggaccacaccggcacgttatggctcagttgctttgacgaagcgggt
caaacaatcgttggcgtgtcagcaaacgaagccatgaagatgaagatggatgacgaagaa
aatggttcgagaaactttacgaatctcatgcaggaagcgacctgtaagaccttcaacttc
cgagtacgtgcgaagatggagacgtaccaggaccaacccaagccacgatatcaagtcatg
aacatatacccactcaacttcgcccaggaggccaataagctcgcccagcttatcaagcaa
tacaacatgaacgaggatagtttgtttgtcagctaa
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integrated database retrieval system