Bipolaris zeicola: COCCADRAFT_27007
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Entry
COCCADRAFT_27007 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_27007
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
COCCADRAFT_27007
Surveillance factors
Other surveillance factors
COCCADRAFT_27007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Homeodomain
Motif
Other DBs
NCBI-GeneID:
19146113
NCBI-ProteinID:
XP_007713205
JGI:
27007
UniProt:
W6Y3E2
LinkDB
All DBs
Position
Unknown
AA seq
1533 aa
AA seq
DB search
MWRSNCFDTHADRRARRTNGATQTFRRPSHATSLSGSTTQPASRDPPAPQNSSTSAGVYV
PPHAQPGRNGSSFEGRYSRGQLTQLFRIQQQAGDLSDGLSDLYMGVWEPHATNGASGASW
GRKDDHGGGREAPSGVDQCWDKDGSILPLSLTDMTDEEREIFLSSVNSPLKPPTQNNNKD
GTPKEPLSLRKSSVSQGAGTPYGLSSPTASRPGARRRDTGEAYPFPSSPATSRFAREEGS
AVTPPPALVRRRTDYKESAEGRPGEERDREKGAGDNSGPFGPAKRSTTAPFSPGAGASPW
SATPGGGFGAFGSFANPQADKKPGYGSLRGESRFKGLMGKPSVEDFGNGPKDKASTNNLG
KLSEAEPSKTDASWMEARTNRPMSSDTDPFPDHEHPTGSAALRGEDVSPPRPQGFGNFAT
PHRPDHRDDSGLSAFGMTTDNMYSKNNFTEQSPLRGAGNEPMSPTDTNPYQSPHHARDQH
DDSDDSGDQNAHFPGMSSFHIDQSVHSSIHNAFGGLGGLGKAVPFETAASDRSQTSSVGP
NRGFPTLPGLGGGLPGLGGASAWPSHTLGTPTRERGGLGGFESAFGNVGEAQSPSLAGLG
NSSLFGHGHGTVGRSSRLGSLFPASMQEQMRSNDPNRAPVDDGSSHGDRQHSMTGTFGRN
AFGGQAPARDTDSPFRANRNLFDDFSNAHHDDHNSTGQPQNIATTSLSMAALNPTRTAQP
STPGVGSPASSQPPVPQQRMMVMPDRMRWIYRDPSGNVQGPFSGLEMHDWYKAGFFSPEL
LVKKAEEPDYEPLAQLIRRIGNSREPFLVPQIGIPHGPATSQPGNSWAGAGPSAAAAPGA
QPPFANSFPSFGTTLTAEQQNALERRKQEEQYLMARQKEHLAAQQQALARQVQMGVIPNQ
LNHHSSAHSLHSQPSFGSITSPGGYQPSPPQGAVPGAPVPGLIDSTFRAGPGPVPGLGPI
GPGMDMMNNRRDQDVPAMMDRLNLGRNNQPQFGFGGQQQDQDAHAQYVASVIGDRARLKR
EQAEHDAMIRQGSAEDVQAARNFAERFAEFNELRVQTDMEQPKAVPPPEGVIGKPSSSSA
QQSQQASEPASPVGADGQEQQSENKEQPSSTGQEPLSLTEQVQKAASAKQSPQSASAWNK
VEPAIFPFPPPPSQSPLPAPAAQRKPIVAENLNAESRSGAATPAADTPSVSVAPWAKEPV
NASHGPSLREIQEMEAKKAAEREAVAAAARREAFEKELQAQNQSPAVQPGLPSSSTWASG
ASPVTPSANNASVWTKPVTSKVAAQPTPSSKKTLQQIQKEEEARKQRAAAQSVAAANVFG
SPVPPPSAGKRYADLAGKSTPASPAGPAGPPGSSPWTTVGASGKVKAPGGTTTPVPGAVR
SASSTIVPSLAKKPTVARSSTAGAPSGKPNAEEEFRKWAVNELRHDLNKNINAEDFVSSL
LSFPADAELITESVHSASSTLDSRHFAEEFLRRRKLADKGIIDERNTSSPAENKAAGSGW
SEVAKKGGANATQQQPLDSSNFKVVAPKKKTKR
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtagcaattgctttgatactcacgccgaccgcagggcccgacgcaccaacggt
gccacgcaaacattccgccgaccctcacacgcgaccagcctatccggatcaacaacccaa
ccagcctcacgagaccctcctgcgccgcaaaattcttcaaccagcgccggcgtatatgtc
cccccacatgcacagcctggccgcaatggcagttcgtttgagggccggtattcgcgaggt
caactgacgcagttgttccggatacagcaacaggccggagacctcagcgacggattgtca
gatttgtacatgggtgtatgggaacctcacgctaccaacggggcctcgggcgcgtcctgg
ggccgcaaagacgatcatggtggtggcagggaagcgccaagcggggtcgatcagtgctgg
gacaaagacggcagcatattgccgctgagtcttacagacatgaccgacgaggaaagagag
atcttcctttcgtctgtcaactcgccgttgaaaccccccacgcagaacaacaacaaggac
ggtactcccaaagaacctctgtccttgcgcaagtcttcggtgtcgcaaggagcaggtact
ccctacggtctgtcctcgcccactgcctcgcgaccgggcgctcgacgtcgcgacaccggc
gaagcctaccccttcccctcctcccccgctacctcacgattcgcgcgcgaagaaggcagt
gccgtcaccccgccgcctgctttggtacgtcgtcggacggattacaaggagtctgcagag
ggtcgtccgggtgaagaacgcgatcgggagaagggtgctggtgacaactcaggtcccttt
ggtcctgcgaagcggagcactacggcgccgttcagcccaggtgctggtgcatcgccttgg
tctgcaacgcctggtggtggctttggtgcatttggaagcttcgccaatccacaagcagat
aagaagcctggctacggtagcttgcgcggcgagagtcgcttcaaaggtctaatgggcaaa
ccaagtgttgaggactttggcaacggcccgaaggacaaagcttcgacgaataacttgggc
aagcttagcgaggcagagccctcaaaaactgatgcatcgtggatggaggcccgcactaac
cgaccaatgagcagcgacacagatcctttccccgaccatgaacacccaacgggcagtgct
gcgcttcgcggcgaagacgttagtccgccccgacctcaaggcttcggtaatttcgcaacg
ccccaccgcccagaccaccgtgatgactctggattatctgcattcggaatgactaccgac
aacatgtatagcaagaataatttcacagagcagtcgcccctccgtggagctggtaacgag
cccatgagcccgacggataccaatccataccagagcccgcatcacgcacgggatcagcat
gacgactcggacgattccggcgaccaaaacgcccactttcctggcatgagcagcttccac
attgaccagtcggtccactcaagcattcacaatgcctttggtggccttggaggccttgga
aaggctgtgccattcgagactgcagcaagcgatcgtagtcaaacctccagcgttggcccc
aatcgaggttttcctaccttgcctgggctgggtggtggtctgcctggtctgggaggtgcc
tcggcttggccatctcacaccttgggtaccccaacccgcgaacgcggcggtctcggtggc
tttgaaagtgctttcggaaacgtaggtgaagctcaatcgccttctctggccggcctaggc
aacagctcgttgtttggtcatggccatggtacagtaggccgctctagcaggctcggctcc
ttgttcccagcttctatgcaagagcagatgcgatcaaacgacccaaatcgagcccctgtt
gacgatggatcttcacacggtgatcgtcagcatagcatgactggcacttttggaagaaac
gcctttggcggccaagcgcctgctcgtgatacggatagccctttccgcgcaaaccgcaat
ctttttgacgacttttctaatgcccatcatgacgatcataactcaacaggacagccccag
aacattgctactacctccctctccatggctgcgttgaacccgaccaggactgcccagcct
tcgaccccaggcgttggaagcccagcttccagccagcctccagttcctcaacagcgtatg
atggtcatgcctgatagaatgaggtggatctaccgcgacccatcgggcaatgttcaaggc
ccattctctggtctggagatgcacgactggtacaaggctggattcttctctcccgagttg
ctagtcaagaaggccgaggagcccgactatgaacctcttgcgcagctcatccgtcgtatt
ggcaactcgcgtgagcctttcttggtccctcaaattggcattccccatggtcccgctaca
tcccagcctggtaactcctgggccggtgccggtcctagtgccgctgctgctccaggagct
caacctccatttgcaaacagcttcccgagcttcggaaccacccttactgccgagcaacaa
aatgcacttgagcgtagaaagcaagaagagcagtacctcatggctcgtcagaaggagcac
ctagctgcacagcaacaagcccttgcccgccaagtccagatgggagtaataccaaaccag
ctcaatcaccactccagtgcacatagtctgcacagccagccaagctttggtagtatcaca
tcacctggcggatatcagccatcgcccccgcagggagccgtaccaggagcacctgttcct
gggctaattgatagtaccttcagagctggtccaggtccagtacctggtctaggccctatt
ggccctggtatggacatgatgaacaatcgcagagaccaagatgtgcccgccatgatggat
cgtctcaacttgggacggaacaatcagccccagtttggcttcggtggacaacagcaggac
caagatgcacatgcacaatatgtggcttcagtgatcggcgatcgggctcgcttgaagcgc
gaacaagcagaacatgatgccatgatccgccagggcagcgctgaagacgtacaggctgct
cgcaacttcgccgagcgctttgccgagtttaatgagctgcgagtccagacagatatggaa
caaccaaaggcagtccctccaccagagggtgtcattggaaagccttcatcttcgtcggct
cagcaatcacaacaagcttctgagcctgcatcgcccgttggcgcagatggtcaagaacaa
caatctgaaaacaaggagcagccatcctctactggacaagagccactatcgcttactgaa
caagtgcagaaggctgcttctgccaaacaatctcctcaatctgcaagtgcgtggaacaag
gttgagcccgcaattttcccattcccgccgccaccatcccagtctcctcttcctgcacct
gccgcccagaggaaaccaattgttgccgaaaatctcaatgccgaatctcgctcgggtgcg
gcaaccccagctgccgataccccaagcgtctcagttgcgccatgggcgaaggagcctgtc
aacgcatcccatggtccttctctgagggagatccaagagatggaagcaaagaaggcggca
gagcgagaggctgtcgcagctgcagctcgtcgcgaagcattcgagaaagaacttcaggct
cagaaccagtcgcctgcggtgcaacccggtttaccttccagttcaacttgggcaagcggt
gcatctcccgtcacacccagtgcaaacaatgcttccgtatggaccaagcctgtgacaagc
aaggttgccgcacagccgactccaagttccaagaagacgcttcagcaaattcagaaggag
gaggaagctcgaaagcaacgtgccgctgctcagagtgttgctgcagccaatgtatttgga
tcaccagtcccaccaccatctgccggaaagcgatatgctgatttggcgggtaagagcacc
cctgcgtcgcctgcaggacctgcagggcctcctggtagcagcccatggaccacggttggc
gcaagtggaaaggtcaaggcaccaggtggtacgacaacgcccgttcctggcgccgttcgc
tcggctagttctactatagtgccctctctcgctaagaagcccacagtcgctcgcagtagt
actgcaggagcaccatctggcaagccgaatgcggaagaagaattccgcaagtgggccgtc
aatgagctccgccatgatcttaacaagaacatcaatgcggaggactttgtctcatctctt
ctcagcttccctgctgacgccgaactcattaccgagtccgttcattccgcctccagcacg
ctcgactctcgccatttcgccgaggagttccttcgccgccgtaagctagcggacaagggc
atcattgatgagcgcaacacttcctctcctgctgagaacaaggctgcaggaagcggatgg
tctgaagttgccaagaagggtggcgccaacgcaacccagcagcaacccctggactcgagc
aacttcaaggttgttgctcctaagaagaagaccaagcggtag
DBGET
integrated database retrieval system