Bipolaris zeicola: COCCADRAFT_27726
Help
Entry
COCCADRAFT_27726 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K15217
RNA polymerase I-specific transcription initiation factor RRN5
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_27726
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
COCCADRAFT_27726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_clus
Myb_DNA-bind_7
PHP_C
Motif
Other DBs
NCBI-GeneID:
19146258
NCBI-ProteinID:
XP_007714122
JGI:
27726
UniProt:
W6Y0P7
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MQAESDWTDEPSRSSKRRRTDAERLARPRKYHLEGKYCDRYRLLFNGIVQQAANRFDSRH
MPYAFYSWQIGSSLWSTAEQATFYSALQRLGRDNVPGIADAVGKSIPEVRELLLLLHGAA
VKQGDAGLTFRDIPAAVEIGDECDAQVELAADALAWYQEKWEARQEQKQHGDYWLITSAV
AVAIENAIDGEVDEPAPPRRGGKVIVGACLSCKKFKQKCDRELPCSNCRRRKMAQCVYPE
SSTRADQPVNSEEPKQDGEPDRSDHAPTTPAILESLPEGSLLHPQNMLKLSRDVFMNRSP
TIPSPWLHWSQYTSDIAQEPSIYRTAFGDFHNLVVSITTRLVRLAMIQSMSRLRSRSKRS
THGALPTVRKRDVRTAIDLAGMPRNSQERWRGVARRCALRVYDQQLSRHGRKKIKREVPW
DEFERIMRPEEPIASTLTTDVETSDDQAEARLRAARKGTPLPIERLALSDSDESSLDETT
QPSQPTQQSRDTTGRYTTGDGQTPTPSTLTLKQHDRKNAQIDELEMWIMLGHDPAKSKYL
NQIDPVSDEDEDEDERVITQPNDWRSFTKYRAEWEELETLPKPEAFEANQTPLAVPPVLH
DDTVEPGDSSSDYTGGPGKKKQRPRKPEPVELEAESAHAYANRKARELAQEMDLPMSESS
RQGYGLSSGSSNSGGEGRYQVRQSIETSGRRAIHSDDEVSEMDWDTFID
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgagtccgactggactgacgagccttctcggtcgtccaagcgccgtcgaaca
gatgcagagagactggcacgaccccgaaaatatcacctcgaaggaaaatactgtgaccga
taccgcctcctcttcaatggaattgttcagcaagctgccaatcgcttcgacagtagacac
atgccttatgctttttattcttggcaaattggttcttcattgtggtctacagccgagcaa
gctactttttactcggctctacagcgactgggaagagacaatgtcccaggcatagcagat
gcagtcggcaaaagcataccagaggtacgcgaactgctcttgttgctccacggtgccgca
gtcaagcagggcgatgctggtctgacttttcgcgatatcccggccgccgttgagattggt
gacgagtgcgacgcccaagtagaacttgcagccgatgcactggcgtggtatcaggagaag
tgggaggcccgccaagagcaaaagcagcatggcgactactggttgatcacttcggccgtg
gctgttgcaatcgagaacgccatcgacggcgaggtggacgagccagcacctccgcgaaga
ggagggaaggtcattgtaggagcatgcctgtcatgcaagaagtttaagcaaaagtgcgac
cgagagcttccatgcagtaactgtaggcgacggaaaatggcccaatgcgtgtatcctgaa
tcatctaccagggctgatcaacctgtcaattctgaagagcccaaacaagacggggagcca
gatagatcagatcatgcaccaactacacccgctattctagaatcactgccagaaggatca
ctgttgcacccacaaaatatgctgaagctgtcgagagacgtcttcatgaatcgctcgcca
acgataccttctccttggctgcactggtcgcaatatacatcagacattgcccaagagccg
tccatctatcgtactgcatttggtgactttcacaacctcgttgtatcaataaccacacga
cttgtacgactggctatgatacaatcaatgtcccgtttacgctcgcggagtaagagatcc
acacacggtgcacttcccacagtaaggaaaagggacgtccgtaccgccatcgaccttgcg
ggtatgcctagaaacagccaagagagatggagaggtgttgctcgacggtgcgcactgaga
gtctacgatcagcagctatctcggcatggtcgcaagaaaatcaaaagagaggtaccttgg
gatgagtttgaacgaatcatgcgcccagaggagcccattgccagcactctaacgacggac
gtggagacttcagatgatcaagctgaagcccggttacgagcagcgcgaaagggaacacct
cttcctattgaacgacttgcactgtctgactcggatgagtcgtcactggacgaaactacg
caaccatcgcagcccacacagcagtcccgagatacgaccggacggtacacaacaggagac
ggtcaaacaccaacgccgtcgacactgacgctgaagcagcatgatcgaaagaatgctcaa
atagacgagttagagatgtggatcatgctcggtcacgacccagccaagtccaagtacctc
aaccagatcgatccggtcagcgatgaggacgaggatgaggatgagagagtcatcacgcag
cccaatgactggcgctcattcacaaagtaccgcgcagaatgggaagaacttgaaacacta
ccaaaacccgaagcctttgaggcaaaccagacacctctcgcagtaccgcccgttctacac
gatgataccgtagaacccggagattctagctccgattacacaggtggaccggggaagaag
aagcagcgcccaaggaagccagaaccagttgaactcgaggcggagagcgctcacgcttac
gcaaataggaaggcacgagagttggcgcaggagatggacctacctatgagtgaaagtagt
cgtcagggttatgggctaagtagtggttccagcaatagtggtggcgaggggcgataccaa
gtaaggcaatccatagagactagtggtcgtagggcgatacactcggacgacgaggtgagc
gaaatggactgggatacatttatcgattga
DBGET
integrated database retrieval system