Bipolaris zeicola: COCCADRAFT_28118
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Entry
COCCADRAFT_28118 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
bze
Bipolaris zeicola
Pathway
bze04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
COCCADRAFT_28118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_28118
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
COCCADRAFT_28118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
19146338
NCBI-ProteinID:
XP_007714599
JGI:
28118
UniProt:
W6Y0F2
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MSSGRPVVHQDYIAKIRYSNALPPPPCPPKLLDIPNTGLSSGQYTSAGFASRLAREQSLN
IEADAELGMPIDLVGIPKVFDGDESAIQAMPHPPPLNAADKALMRPPNALGKSTSHVSGA
TFLRRTEYVTASTTGGSKFESSNSSNTMRLRRKRKQVETSLDDPTNISRHILKGFNIAYP
ADAYNGQDNAENIRAAESTPEERLAWNKPKHPRNPNLKLLDSYPLLPDWDATPDTGGYMV
FKFTAPPINNPLDPSYDPRLDVALLRPAGQTIQDQERYMEDLQAHKLDPTVPPPIARYQF
EFFLPSDKSKVRGIKRNFTTHDPTNEADIDFDIAEDDEGQPRKCFKYDNIRTYETSQQVG
DPSDTYGDVVALALHDPEKHESEPLRDTKLQKAAYFYPITQRTSLRPRRPGRVDMTEEQP
KVDIIEAAGKDPESHERREMYRKRAEGMDIGE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagctccggacgcccagtcgtccaccaggactacattgcgaaaatcagatattcaaat
gcgctgcctcctccaccatgccctcccaagctgctagacattcccaacaccggcctatcg
agcgggcagtacacgtcggcgggctttgcatctaggcttgcgcgagaacaatcgctgaat
attgaagctgatgctgagctgggtatgcccatcgatctggtcggtattcccaaggtattc
gatggagatgagtctgctattcaggctatgcctcacccgccgccgcttaatgccgcagat
aaggcgctgatgcgaccgccaaatgcgctcggaaagagtaccagccacgtctcgggcgct
accttcttgcggcgaacggaatacgttaccgcaagtaccactggcggctctaagttcgaa
tcgagcaattcgtccaacactatgcgcctgcgtaggaagcggaagcaagtcgagacgtcc
ctcgatgatcctacaaacatctcgcgacacattctcaagggcttcaacattgcctaccca
gcagatgcgtacaatggacaggacaacgcagagaacattagggcggcagagtcgacacct
gaagagcgactggcatggaacaagcccaagcaccccaggaaccccaatctcaagctgctc
gactcgtacccgcttcttccagactgggacgctacacccgatactggtggatacatggtc
ttcaaattcaccgcaccacccatcaacaacccactcgatccctcatacgacccacgactt
gacgtcgctcttctccgtcccgccggtcagaccatccaagatcaagagcggtacatggaa
gacctccaagcacacaagctcgacccaacagtcccgccacccattgcacgctaccaattc
gagttcttcctaccctcagataagagcaaagtccgcggcatcaagcgcaacttcaccaca
cacgaccccaccaacgaagccgatatcgactttgacattgccgaagacgacgaaggccag
ccccgcaagtgcttcaaatacgacaatatccgcacctacgagacatcgcagcaagtcggc
gacccaagcgatacttatggtgatgtcgtcgcccttgcactacacgaccccgagaaacac
gagtctgaacccctgcgcgataccaagttgcagaaggcagcatacttttaccctattact
caacggacgagcttgaggccgagacgacctggtcgtgtcgatatgacggaggagcaacct
aaggtggatatcattgaggctgcgggtaaagatccggagtcgcatgagcggagggagatg
tacaggaagagggctgagggcatggatattggggagtag
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