Bipolaris zeicola: COCCADRAFT_29544
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Entry
COCCADRAFT_29544 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bze
Bipolaris zeicola
Pathway
bze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COCCADRAFT_29544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bze03400
]
COCCADRAFT_29544
DNA repair and recombination proteins [BR:
bze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
COCCADRAFT_29544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
19146591
NCBI-ProteinID:
XP_007716334
JGI:
29544
UniProt:
W6XUD9
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MHRPKSLATGEATPLKPAARLYGGTPQSTERLIKPFRCPGSATVSRVSEKPARKRRKVDY
SGAGGEDGESDKPYSNEDRLALATRDANRFPVFKPKDKETAFRAKFIVPLVNKDTGAYNP
NRPAPLLGMRTGTVFVARPLHDPSGEFAIVLYDPTVDDKPEPKQEPEPKESQTEKKELDA
PLVHKSLAEILGLKKKVDNERPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDSKAN
GCIMADEMGLGKTLQCITLMWTLLKQSPEAGKSTIQKCVIACPSSLVRNWANELVKWLGK
DAVTPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLRLYVDEFGQTPIGLML
CDEGHRLKNGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPGYLGTRMEFR
KQFEIPILKGRDANGTDADVQKGNERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFC
NLAPFQKDLYNHFIKSPDVQSLLRGKGSQPLKVIGMLKKLCNHPDLLNLPEDLPGCEDKL
PEDFVQKDARGRDREVKVWYSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCR
SRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEFVFLLSSKAGGCGLNLIGANRLVLFDPD
WNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVER
HFSLDSLRELFQYRDNTTSDTHDTFKCKRCRKEDGKQIMKAPAMLYGDTSTWNHFVNDGE
TGALGKIQDLLLRQETANDLKDVSAVFQYISH
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggccgaaatcactcgcaactggcgaggctacgccgttgaagcctgcagcgcgt
ctctatggtggcactccacagtcgaccgagcgtctaatcaagccatttcgatgtccaggt
tcagctacagtgtcgcgagtatcagaaaagccagcgaggaagaggaggaaagtcgattac
tctggcgctggtggtgaggatggggaaagtgataaaccatactccaacgaggatcgatta
gccctcgccacacgagacgcgaaccgattcccagtgttcaaacccaaagacaaagagact
gcattcagggcaaaatttattgtgcctctagtcaataaggacaccggagcatacaaccca
aaccgaccagcgcctctactgggaatgcgaactggaactgtcttcgttgcacgaccactg
catgatcccagtggagaatttgcaatcgtattatacgacccaactgttgacgataagcct
gagccgaaacaagagcctgagcccaaggaaagccaaactgagaagaaggagctagatgct
ccactggttcataagagtttggctgagatactgggtttgaagaagaaggtagacaacgag
cggccgcgtgtaccagtggtgatagatccaaggcttgccaaggttctgcgaccccatcag
gtcgaaggagtgaagtttttgtaccgagccacaactggtatgattgattcaaaggcgaac
ggctgtatcatggccgatgagatgggtctcggcaagacattgcagtgtatcacgctgatg
tggacgctgttgaaacagtcgcctgaagctggtaaatccacgatacagaaatgtgttatt
gcatgtccctcaagtttagtgagaaactgggcaaacgagctggtgaaatggctggggaaa
gacgctgttacccctttcgcgatcgacggaaaagcgtcgaaagaagaactgattcaacaa
atacggcaatggtcaatagcatctggacgcgcagttgttcggccagtgttgattgtgtct
tatgaaacactgcgactttacgttgacgaatttggacaaacgccaattggattgatgctt
tgcgatgaaggtcatcgattgaagaatggagacagcttaactttcacggccttgaacagc
ttgaacgtacagagacgtgttattctctccggtacgcccatccagaacgatctttcggag
tattttgcactgctcaattttgcgaatcctggttaccttggtacacgtatggagttccgc
aagcaatttgaaatacccattctgaagggtcgcgatgccaacggaacagacgccgacgtg
cagaagggtaacgagcggctcacagagctattgggtctggtcaacaagttcatcatcaga
cgaactaacgacattctctccaaatacctaccagtcaaatatgagcacgtcgtgttctgc
aatcttgcaccatttcaaaaggacctatacaaccatttcattaaatcaccggatgttcaa
agcctgttacgcggcaaaggttcgcagccccttaaggtcattggcatgctcaagaagctg
tgcaaccaccctgacctactcaatctaccagaagacttgccagggtgtgaagataagcta
cctgaagattttgtgcaaaaggacgcacgaggtcgagaccgggaggttaaggtatggtac
tctggaaagatggctgtccttgaccgtatgcttgcgcgcatccgcgctgagacaaacgac
aagatcgttttgatttccaactacactcagacactcgacatttttgccatgctttgccga
tcacgtggatatggctgtttccgcctagacggtacaatgaatgttagcaaacgacaaaaa
ctggttgacaagttcaatgacccggaaagccctgagtttgtcttccttctctcctccaag
gccggtggatgtggtctcaatctcattggcgctaaccgacttgtccttttcgatcccgat
tggaacccagctgctgaccagcaagcccttgctcgtgtgtggcgtgatggccagaaaaag
gactgcttcgtgtaccgcttcatcaccaccggtaccattgaagagaaggtcttccagcga
caatctcacaagcagtcgctctcgtcctgtgttgttgattctgcagaggatgtagagcgg
cattttagtcttgactcacttcgtgagcttttccaataccgcgataatacgactagtgat
acccacgacaccttcaaatgcaagcgatgccgaaaagaggacggcaagcaaattatgaag
gctccggccatgttgtatggtgatacgagtacttggaatcattttgttaacgatggggag
acgggcgcacttggcaaaattcaggatttgttgcttagacaggagacggcgaatgacttg
aaggacgtcagtgctgtattccagtatataagtcattga
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