Bipolaris zeicola: COCCADRAFT_30340
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Entry
COCCADRAFT_30340 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bze03016
]
COCCADRAFT_30340
Enzymes [BR:
bze01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
COCCADRAFT_30340
Transfer RNA biogenesis [BR:
bze03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCCADRAFT_30340
Prokaryotic type
COCCADRAFT_30340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
19146736
NCBI-ProteinID:
XP_007717300
JGI:
30340
UniProt:
W6XMC8
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MATSPKEGKKKVLEGIFAVNKTQWASSAGVLRDLQEHFARSSLLAPWLESQKRSLILSHA
KQKHINNLKVKLGHGGTLDPMATGVLIVGLGRGTKCLQRFLECTKTYECVVLFGAATDSY
DAVGKVVSKAPYEHVTKELVEEKLAQFRGKIMQKPSVFSALKVDGKKMYEYAREGKEIPE
VAARPVEVEELELVEWMEPGSHEYAWPKEEVDGVEMEGAKKLLGIREEDAKIHANTMARK
GRKRSRSPESDSVEGAGKQPKMPKSETEPAMSGALPSQDTPAEATETIQDDTTQAATDAA
LPTQENPETSSKETEVADQAQPSNEDSATFTQSSPQPPAARLRMTVTSGFYVRSLCHDLG
LACSSLGLMSSLIRSRQGAYTLGQNVIELSDFESAEKWEPQLQQQLEEFMEKEGWEAEEL
EDEETWQAKKEERLSERKDEDRERSYRGSGGGGGKNKWNKGKGKYSRNQYSKNMDGGKKE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcccccaaagagggtaagaaaaaggtgctcgagggcatcttcgccgtcaac
aaaacgcaatgggcctcctcagccggcgtgctacgcgacctgcaagagcactttgctcgt
tcatcgctccttgcgccttggcttgagagccaaaaacggtcgcttatcctgtcgcacgca
aaacagaagcatatcaacaatctcaaggtaaagcttggtcatggcggtactctggatcca
atggctactggtgtcttgattgtcgggctgggacgaggcacaaagtgcctgcaacgcttt
ctggaatgcacaaagacgtatgaatgcgtggtgctatttggtgccgctacagacagctac
gacgctgttggaaaggtagttagcaaggcgccatacgaacatgtcacaaaagagttggta
gaagagaagctggcgcagttccgtggcaagattatgcagaagccaagtgttttctcagcg
ctcaaggttgatggcaagaaaatgtatgagtacgcaagagagggtaaggagatacccgag
gtagctgcacgacctgtggaagtggaggagctggagcttgttgagtggatggaaccagga
agccacgagtacgcgtggccaaaggaagaggtcgatggtgtcgagatggaaggcgcgaaa
aagctacttggcattagagaggaagatgcaaagattcatgccaacaccatggcgcggaag
ggacggaaacgatcacgttcgccagagagcgatagtgtagaaggagccgggaagcaaccg
aagatgcccaagtcagagacggagccagccatgtctggtgctttaccatcacaagatacg
ccagcggaggcaaccgagacaattcaggatgatactacacaagccgctactgatgcggca
ctacccacacaggaaaacccagaaacttcatccaaagagactgaagtagcagatcaagca
caaccatcaaacgaggactcagccacattcacacagtcatcaccacaacccccagcagcc
cggctccgcatgaccgtcacatcaggcttctacgtccgctccctctgccacgacctaggt
ctcgcctgctcctccctaggactcatgtcctcgctaatccgctcacgccaaggcgcctac
acactgggccaaaacgtgattgaactctctgacttcgagtccgccgagaaatgggaaccg
cagctacagcagcagctggaagaattcatggaaaaagaagggtgggaggctgaagagcta
gaagatgaggagacgtggcaggcgaagaaagaagagcgcttgagtgagaggaaagacgag
gatcgcgagaggagttatcggggtagtggtgggggcggcggcaagaataagtggaacaag
ggtaaaggcaaatactcgcggaatcagtattccaagaacatggatggcgggaagaaggaa
tag
DBGET
integrated database retrieval system
