Bipolaris zeicola: COCCADRAFT_3126
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Entry
COCCADRAFT_3126 CDS
T03110
Name
(RefSeq) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bze
Bipolaris zeicola
Pathway
bze00040
Pentose and glucuronate interconversions
bze01100
Metabolic pathways
Module
bze_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCCADRAFT_3126
Enzymes [BR:
bze01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
COCCADRAFT_3126
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
19146914
NCBI-ProteinID:
XP_007709966
JGI:
3126
UniProt:
W6YDL8
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MLGNNLSTLLALVSATQVAAVPSNCPRRHPPPPFNPICHVTQYTQIPAAVAACTHITLDN
IRVPGNRTIDLSKLQRGAKVTFAGTTFWEYAAANYPFIVVSGTDIEITAAPFAVLNGNGP
AWWDGLGSNGGRIKPNHFIEVKNVTGCSAIHDIYIKNYPVHCFSITNSVDLDVYRIRLDN
AEGYAPNNVSNGLAAAHNSDGFGVASSKQVRIRDSVVVNQDDCVAVTSGDGVVVDNMWCN
GSHGLSIGSVGGKSNNIVNNISFTNSIVLNAENGARIKSNSNTTGSISNILFKNIFLENI
SIYGIDIQQDYLNGGPTGKPTNGVKIQNITMQNIWGTATREGRNYYILCGEGSCSDFTFN
NVHVTGGGKPSSCNFRTKGDFDCDGKFVS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcaataacctttccaccctcctcgctctcgtcagcgccacacaagtcgctgcg
gtgccctcaaactgcccacgcagacacccgccgccacccttcaaccccatctgccatgta
acccaatacacgcaaatccccgcggcagtagccgcctgcacgcacatcaccctggacaac
atccgcgtacccggcaaccgcaccatcgacctctccaagctgcaacgtggcgccaaagta
accttcgcgggcaccacgttctgggagtacgccgcagcaaactacccctttatagtcgtc
agcggcaccgacatcgaaatcaccgccgcccccttcgctgtcctcaacggcaacggcccc
gcatggtgggatgggcttggcagcaatggtggccgcatcaagcccaaccactttatcgaa
gtcaagaacgtgactgggtgttctgccattcacgatatctacatcaagaattaccctgtg
cactgcttttcgattacgaatagtgtggacttggatgtgtatcgtattaggctggataat
gcagagggttatgcgccgaataatgtgtcaaatgggttggcggcggcgcataatagcgat
gggtttggggtcgcgagtagtaagcaggtgaggattagggatagtgtggttgtaaatcag
gatgattgtgttgcggtgacgagtggggatggtgtggtggtggataacatgtggtgtaat
ggaagtcatgggttgtcgattggatcggttggtggaaagtcgaataacatcgtcaacaac
atctcctttacaaactccattgttctcaacgccgagaacggagcaaggatcaagtcaaac
tcaaacactacgggttccatttcgaatattttgttcaagaatatctttctggagaatatc
tccatctatggtattgatattcagcaggactacctcaacggtggcccaacgggaaagccg
acgaatggcgtcaagatccagaatatcaccatgcagaatatctggggcacggcgacgcgc
gagggacgcaactactatattctgtgtggagagggaagttgcagtgatttcacgtttaat
aacgtgcatgttacgggaggtggaaagcctagttcgtgcaatttcaggacaaagggggac
tttgactgtgatggcaagtttgtgagttag
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