Bipolaris zeicola: COCCADRAFT_31767
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Entry
COCCADRAFT_31767 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_31767
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCCADRAFT_31767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Nucleoporin_FG
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
19147021
NCBI-ProteinID:
XP_007706365
JGI:
31767
UniProt:
W6YP12
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MGVCTYYQRGACKFGDSCKNEHPGSSRDANRGGSAFGGSNNNRFGAFNGDRYRPGQNGSS
NTFGGNRDAKSPSFHLDRDDMKNDLTTQRPIYPLSCYGPGREAPRQLIEGPVEISPEELR
LRYYTLRTAGNEPQAQQEESALNEKMQQQVKAILDDIPGAIRYIEEGANVHPNRIDIAKG
NASASDSTNAANTSSAAASNPFMKAPGNPFQTAAASQGSAFGQTSTPAFGKPAFGQPSNP
AQTTSAFGQPSNPGQTTSAFGQASTPGQTASPFGQASNTGQTSSAFGAASALGQKPSPFG
QPSALGSGGSAFGKPAFGASGFGQPSMPGAGSAFGQASSLGAGSAFGKPSTPGAASGFGQ
TNALGQKPNPFSKPGFGQSGFGQPAQPGANASPFAQAAQSGASPFGQTAQSGTSPFGQAA
QSGPSPFGQQAQQTPQPSPFGQQAQQSQNPSPFGQTQQTPAQPSPFPSAAASQTPAFGQP
SKPSPFGTQPTQPAATQSQPANPFSTAQKSAAPASTPSPFATQPTANMTTPNQPAQQQAP
ATQPASAGRPHVPGVTPDGKPIDAKDRYKEGKPEEYEGEQGKMLEEIYKRVAQLGRFNDD
EDIPLTPPKCEWIAPLTL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtctgcacgtactatcagcgaggcgcatgcaagtttggagattcctgcaaaaat
gaacaccccggaagttcgcgagatgcgaaccgtgggggaagtgcctttggcggttcaaac
aacaaccgctttggcgccttcaacggggatcgctatcgtcctggccaaaatggcagttcc
aacacatttgggggtaaccgtgatgctaaatcgccaagcttccatctggatcgggacgac
atgaagaacgacctcaccacccaacggccaatctatccgctgtcttgctatggcccagga
cgtgaggctcctcgccagcttatcgagggaccagtcgagatcagcccagaagagcttcgt
ctgcggtattatactttacgcacagctggcaatgagccccaagcgcaacaagaagaatct
gctctcaatgaaaagatgcagcagcaagtgaaggcaatcctcgatgacatacctggtgct
atccggtatatagaagaaggcgccaatgttcatccgaatcggattgacattgccaaaggc
aacgctagtgcaagtgactcaaccaacgctgcaaatacatcttcagccgcagcctctaat
ccgtttatgaaagcacctggaaacccattccagacagcagcagcctctcaaggatcggcg
ttcggacagacttcaacaccagccttcggcaaaccagcttttggccagccgtcaaaccca
gcacaaaccacatccgcttttggtcagccttcaaatcccggtcaaactacctcagctttc
ggtcaggcttcaaccccgggccaaactgcgtcaccgtttggtcaagcatcgaacacaggc
cagacatcctcagcctttggtgccgcctcagcacttggtcaaaagccatcaccatttggt
cagccttcagctttgggtagtggtggcagtgcatttgggaaacccgcctttggcgcctct
ggatttgggcaaccgtctatgcccggtgcagggagcgcatttggacaagccagtagcttg
ggtgcaggctctgctttcgggaagccatcaacaccaggcgcggcatctgggttcgggcag
acgaatgctctagggcagaagccgaatcccttcagtaaaccaggctttggacaaagcgga
tttggccagcctgcgcaacccggcgctaatgcctctccttttgctcaagcggcacaatcc
ggtgcatcgccattcggccagacagcacagtctgggacgtctcctttcgggcaagcagca
cagtcgggtccttcaccttttggccaacaagctcagcagacacctcagccttcgccgttc
ggccaacaagcccaacaatcacagaatccaagtccgtttggacaaacgcagcagacacct
gcacagcccagtccgtttcccagcgccgctgcatcacaaaccccagcgttcggccagcca
agcaaaccctcaccttttggcactcagcccacacaacctgccgcaacacaatcacagcca
gccaaccccttctccacagcacagaaatctgcagccccagctagcacaccttcacccttt
gccacccagcctactgctaatatgactacgcccaaccagccagcacaacagcaagcccct
gctacacagcccgcttcagcagggcgtccacatgtacctggtgtcacgcccgatggcaaa
cccatcgatgccaaggaccgctacaaggaaggcaagcccgaagagtatgagggcgagcaa
ggaaagatgctggaagagatctacaagcgtgttgcccagctcggtcggttcaacgatgac
gaggatattccgcttacaccgccaaagtgcgaatggatcgcgcccttgacattgtag
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