Bipolaris zeicola: COCCADRAFT_32891
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Entry
COCCADRAFT_32891 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bze03009
]
COCCADRAFT_32891
Enzymes [BR:
bze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCCADRAFT_32891
Ribosome biogenesis [BR:
bze03009
]
Eukaryotic type
Pre-60S particles
Helicases
COCCADRAFT_32891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
Med3
Motif
Other DBs
NCBI-GeneID:
19147352
NCBI-ProteinID:
XP_007707714
JGI:
32891
UniProt:
W6YET7
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MAKRKLNEHDVPEETSGDESHSERSTSPEPSQPAATATEPVTTTATPKNKKSTKATKAAE
PAHVASFAELQLEPRLLRAIRDLKWTSPTAVQSQAIPLALEGRDILARSGTGTGKTAAYL
LPILHKTLQRKQTSLILAPTRELCQQIATVAKSLAQHCNQEIRVRNIAGKESDAVVKAAL
ADKPEVVVATPARAWTNINNSTLAVNDLCTLVVDEGDLINGYGFAEDMTNIAREIPVGVQ
KFVLSATLSTDVEALGSLLCTDPVILKLADLDKDSKRVKQYVLKVAEDEKFLLIYAMFKL
QLIKGKTIVFVGDVDRSYRVKLFLEQFGIKSAVLNSELPLASRTHIVEEFNKNVYNILIA
SDENDVVGVQDEDSKPKKKKAKRNNDSKDSGVSRGIDFLNVACVLNFDFPGNYKSYFHRI
GRTARAGKSGTAISFIIPKEKYRKHKPTSFAGCENDEEVLKKVEKHQQEGQKLENYNFDM
KRLEPFRYRFADALKSVTRIAIREARIKEIHSELAKSQKLSRYFEENPEALAHLRHDQTL
NHPLRIQPHLKHVPDYLLPGGKKPEDVGFVGLNLPKPDRKRFVKGRGRKVVKRNGKVDPL
KTFNARGKGKK
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgaaagttgaacgagcatgatgtgccagaagaaacgtcaggtgacgagtca
cactctgagcgcagcacttcacccgaaccttcgcaacctgcagcgaccgcgaccgaaccc
gtgacgaccaccgcgacgccgaagaacaagaaatctacaaaagctaccaaggcggcagag
ccagcgcatgtcgcatcttttgccgaacttcagctagaaccccgcttgttacgagcaatc
cgcgatttgaaatggacatctcccacggcagtgcagtcacaggccataccgctggcgcta
gagggccgtgatattctggctagatcaggcacaggaacaggaaagacagctgcctacctt
cttcccatcctacacaaaacactgcaacggaagcagacgtcgctcatcctggctccaacg
agagagttgtgccagcagattgcgaccgtcgccaaatccctcgcacaacactgcaatcag
gaaattagggtacggaatattgcgggcaaggagtcggacgctgtcgtgaaggcagcgctc
gccgataagccagaagtggttgtggctacaccagcgagggcatggaccaacatcaataac
tccacattggccgtcaacgacctttgtacgctagttgtggacgaaggtgatttgataaac
ggctatggtttcgccgaggatatgaccaacatagctcgtgagatacctgttggcgtccaa
aagtttgttctctcagctactctctccaccgacgttgaggctctcggtagcctgttgtgt
accgatcccgtcattctcaaacttgccgaccttgacaaagactcgaaaagagtgaagcaa
tatgttctgaaggttgccgaagacgagaagtttctcttgatctacgccatgttcaaattg
cagctgatcaagggtaagacgattgtcttcgttggcgatgtcgaccgatcatatcgcgtt
aagcttttcctcgaacaattcggaattaagagtgccgtgctcaattcagaacttccgctt
gcgtcacgcactcacatcgtggaggaattcaacaaaaacgtgtataacattctcatcgcc
agtgacgagaacgatgtggtcggagtccaagacgaggactcgaagccaaagaagaagaaa
gcaaagagaaataacgacagcaaagactcaggcgtttctcgaggtattgacttcttgaat
gttgcctgtgtcctcaactttgacttccctggtaactacaagtcttattttcaccggata
ggaaggactgcgcgagcaggaaagtccggaaccgccatctcgttcattattcccaaggaa
aagtacagaaaacacaagcccacaagcttcgccggatgtgagaacgacgaggaagttctc
aagaaggtcgagaagcaccagcaagaaggccaaaagctagaaaactacaattttgacatg
aagcgcctagagccattccgataccgctttgcagacgcgctcaagtcagtcacgcgaatc
gctatccgagaagcccgcatcaaagaaatccactcagagctcgccaaatcacagaagctc
tcgcgatacttcgaagaaaaccctgaagccctcgcccatctccgccacgaccagactctc
aaccaccccctcaggatacaaccgcatctcaagcacgtaccagactacctattacccggt
ggtaaaaagccagaggatgtcgggttcgtcgggctcaatcttccgaaacctgatcgtaag
aggtttgtcaagggtagggggaggaaagtggttaagcggaatggcaaggtagatccgttg
aagacatttaatgcacggggtaaggggaagaaatag
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