Bipolaris zeicola: COCCADRAFT_33556
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Entry
COCCADRAFT_33556 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_33556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_33556
03009 Ribosome biogenesis [BR:
bze03009
]
COCCADRAFT_33556
Enzymes [BR:
bze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCCADRAFT_33556
Spliceosome [BR:
bze03041
]
Complex A
U1 snRNP components
U1 related factors
COCCADRAFT_33556
Complex B
COCCADRAFT_33556
Ribosome biogenesis [BR:
bze03009
]
Eukaryotic type
Pre-60S particles
Helicases
COCCADRAFT_33556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phos_pyr_kin
TENA_THI-4
DEAD
Helicase_C
PfkB
ResIII
P-loop_SecA
Carb_kinase
Motif
Other DBs
NCBI-GeneID:
19147543
NCBI-ProteinID:
XP_007708543
JGI:
33556
UniProt:
W6Z080
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MPPKRILVIAGSDSSGGAGLEADQKVIAAHGCYAMTATTALTAQNTLGVQDIHHTPPDFV
KKQIDAVCDDIGADVVKTGMLASAETIKIVADALKRHNISTSVVDPVTVSTSGSQLLPEA
AVTTLIEHLLPHTTLLTPNLPEAKLLLKAAGVELPDPQNIDDIIAMARHIHERGPKWVLL
KGGHLPLTRSHFVSKEEADREVVLNVLVGDSGVTLIESDYLQSKNTHGTGCSLASAISCN
LALGMPMIKAVKEANRYIEAGIKTAMDIGRGSGPINHFHSIYTLPFTPGNFISYLLDRDE
VQIPWKEYTEHEFVQRMGDGTLPLEKFMYYLVQDYQFLVQFARATALAAYKSSNLKDIGQ
SVQQVVTLQEEIQLHIDFCKEYGLSEADIISEEEDQATTAYTRYVLDIGMSQDFLALQIA
LLPCLIGYGIIAKRLYEDPNTVRTGSRYWKWIEQYVADEYRGAMMRGSELVEKHAAGLSP
SRVEELAKVFVHATKMERGFWDMGLRAAHTHIMSYGGGYGGGGRDGGRGYSNGYDYSNAG
YGSYSNSTSQYASYGFLSGGYGGGSNGYSGGGGGGGYGGGGYGGGGYGGRDGGDRMSQLG
QGLKQQQWDLDALPKFEKSFYKEDPAVTARSEAEVAEYRKEHQMTVKGTNIPKPVTTFDE
AGFPSYVMNEVKAQGFAKPTAIQAQGWPMALSGRDVVGVAETGSGKTLTYCLPAIVHINA
QPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLARGV
EVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMW
SATWPKEVRQLAADYQKDWIQVNIGSMDLSANHRIQQIVEHLETIMSDKENKILIFTGTK
RVADEITRFLRQDGWPALSIHGDKAQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNIT
HVFNYDYPNNSEDYVHRIGRTGRAGANGTAITLFTTENSKQARDLVQILTESKQQIDPRL
HEMARYGGGGGGGRWGGGRGRGGGRGGGRGGWTGGNGDPVRNSRW
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagcgtatcctggtaattgctggctcagatagttcgggtggggccggacta
gaggctgatcagaaggttattgcagcacatggctgctatgctatgactgctactaccgcg
ttgacagcacagaatacgctaggtgtgcaggacatacatcatacacccccggactttgtg
aagaagcagattgatgctgtttgtgatgatatcggagccgatgttgtcaagactggcatg
cttgcgtcggcagagacgatcaagattgtcgccgacgcgttgaagagacacaacattagc
acgagtgttgttgaccctgtaacggtctcgacatcgggttcacaacttcttcctgaagcg
gcggttacaacactgatcgaacatcttctccctcatacaacgcttctaacaccaaatctc
ccagaggcaaaacttcttttgaaagctgcaggcgttgaattgccggacccgcagaatatt
gatgacattatcgcaatggcacgtcatatccacgagagaggacccaagtgggtgttactt
aagggaggccacctaccattaacacgcagtcattttgtcagtaaagaggaggcggaccgg
gaagtagtactaaatgtgctagttggagacagtggagtcaccttgatagagagtgattat
ttgcaatcgaagaacacccatggcacagggtgttcacttgcttcagcaatctcgtgcaac
cttgctctcggtatgcctatgatcaaggctgtcaaggaagccaatcgatacattgaagcc
ggaatcaaaacagcgatggatatcgggcgggggagtgggccgatcaatcatttccattca
atatacactctccctttcactcccggtaactttatctcctacctacttgatcgagatgaa
gtacaaataccatggaaagagtatacagagcatgagtttgttcagaggatgggagatgga
acactaccactcgaaaagtttatgtactatcttgtgcaagattaccagttccttgttcaa
tttgcaagagctaccgctctcgcagcatacaagtcaagcaacctcaaagatattggtcag
tccgtccaacaggttgtcactctccaagaggagatacagcttcacattgatttctgcaaa
gaatatggactctccgaagccgatattatcagcgaggaagaggaccaagctaccacagca
tacacgcgctacgttcttgacattggcatgtcgcaagacttccttgccttacagatagcc
cttctcccttgcctgataggctacggcatcattgctaagcgactatatgaggacccaaac
acggtcaggactggcagtagatactggaagtggatcgagcagtatgtagcggatgagtac
aggggtgcgatgatgaggggaagcgagcttgtggagaaacatgcagcaggcctaagtcca
agcagagtggaggaactagctaaagtgtttgtccatgcgactaaaatggaaagaggtttc
tgggacatgggattgcgggctgcacacacgcacatcatgtcttacggcggtggatatggc
ggcggcggtcgcgatggcggccgtggctactcaaacgggtacgactacagcaatgctgga
tatgggtcttatagcaactcgacaagccaatatgcatcgtacggttttcttagtggtgga
tacggcggcggctccaacggctactctggtggcggtggtggtggtggttacggcggcggt
ggctatggcggtggcggctatggtggtcgcgatggaggtgaccgcatgtcgcagctcggc
caaggcttgaagcagcagcaatgggatctcgacgctcttcccaagttcgaaaagtccttc
tacaaggaggatcccgcagtcaccgcgcgctccgaggctgaggttgccgaataccgcaag
gagcaccagatgactgtcaagggcacaaacattcccaagccagtcacaaccttcgatgag
gctggtttcccatcttatgttatgaacgaggtcaaggctcagggcttcgcaaagcctact
gctattcaggcgcagggttggcccatggctctctctggtcgcgatgttgtcggtgtcgct
gagactggttccggaaagaccctcacctactgtcttcccgccatcgtccacatcaacgcc
cagcctctcctcgctcctggcgacggtcctatcgttctcatcctcgctcccacacgtgaa
ctcgctgtccagattcagcaggagatcagcaagttcggaaagtcttcgcgcattcgaaac
acctgtgtctacggaggtgttcccaagggtcctcaaatccgtgaccttgcccgtggtgtt
gaagtgtgcattgccactcccggacgtcttattgatatgctcgaagcaggaaaaacgaac
ctccgccgcgtcacttacctcgttctggacgaggccgaccgcatgcttgacatgggtttt
gagcctcaaattcgcaagatcattggccaaattcgtcctgatcgtcagacttgcatgtgg
tcggctacatggcccaaggaagtccgccaactggctgctgactaccagaaggactggatc
caggtcaacattggttccatggacctctctgctaaccaccgtattcaacagatcgtcgag
catctcgagactattatgagcgacaaggagaacaagatcctcatcttcacaggtaccaag
cgtgttgcggacgaaattacgcgattccttcgtcaagacggctggccggcgctctccatc
catggtgacaaggcgcaaaacgagcgtgactgggtccttaacgagtttaagacgggcaag
agcccaatcatggttgctactgacgtagcttcccgtggtatcgatgttcgcaacattact
cacgtgttcaactatgactacccgaacaactcggaggactatgtccaccgcattggtcgt
actggtcgtgctggcgctaacggaactgccatcacccttttcactacagagaactccaag
caagctcgtgacctcgttcaaattcttacagagtccaagcagcagattgacccccgtctt
catgagatggcccgctacggtggtggcggcggtggtggtcgctggggaggtggccgtggc
cgtggaggaggccgcggcggcggtcgtggtggctggactggaggtaacggtgatcccgtc
cgcaacagccgctggtaa
DBGET
integrated database retrieval system
