Bipolaris zeicola: COCCADRAFT_3438
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Entry
COCCADRAFT_3438 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K23358
transcription initiation factor TFIID subunit 1, fungi type [EC:
2.3.1.48
]
Organism
bze
Bipolaris zeicola
Pathway
bze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCCADRAFT_3438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_3438
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_3438
Enzymes [BR:
bze01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
COCCADRAFT_3438
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCCADRAFT_3438
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
COCCADRAFT_3438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
zf-CCHC
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
19147733
NCBI-ProteinID:
XP_007710350
JGI:
3438
UniProt:
W6YCC9
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MDDEHNPTASSHSDAAEDEDFARIMRQAQMGAAEGEEDLLSGIASRPLEAGEKADDAVDY
EDIGDDDLPEEEFESGGGDDDAGINFSGTTMQDSGGTLDNGDVDMDDLFGDGDAQDDLFG
DDPDHSDPTRENTQHKDDPLTSIEDLVSEGFSVAGQDKSQQSSRTNAQTATQEEEEEEED
PEVREQLALFAQSLRKKDELADAPKKTSREEFEKIWPNFEADKPPRFFSLVPRKRAFYIP
KVPPKAPRPFQMNKLTLDIAPDQEKSFRLHPTTTAKSGRQQEEEQGGIIQITSTTEDDGD
GNEQMDFDHFDTINDHEMIGNVSWSDLRIACEDWEVPDDSNAAILSENGQAPTPPDSVNA
GQSPNKKRRLGDHDQPIQFSVYDHMDLPTWDDPELETAKLSKKILLDMNDPHLLLDVQQP
SAEPPKPRTLGLGLKRDSRGSLANPMFKRYNISNDEAYDALKESSQQKVRSTIGHMNVEH
SLPALKLQYPFYKVALSDRELRSFHRPTITFKPGERASISSLKSVKRKHKKNLKPSEAFA
TAEDLNIGDNSDLLLAEYSEEYPTTLSNFGMGIKILNYYRRKDMEDTARPKPEDGIGETS
ILLPQDKSPFSLFGQVEPGQQVLTLHNAMYRAPVFKHKPEETDFLVSRSWTGVNGPRYYM
RTIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRKGQQRGARQPWVSNEMI
KQHLPGTEIAQNRSRMREIMKYQKDIGTWEPVPGETVPEEPILRTWIKPEDVCLIDSMHA
GDKQLQDAGIKSNEIRDDDDEADNENADVKLAPWNTTKNFLNACAGKAMLELHGEGDPTG
QGLGFSFIKVSMKGGFRDVGESAADRLDSKKMKELGGHSYNVQRQQVMYENAIKRIWNKQ
KESLSAQNPPSDTEDDVDTAVPRNNLPRQRSEMGTPATMRHDDETMSQMSRNSNADNRGK
KLKITRTIKNKYDEYEDVTEIITDPAVIQLYIKHKRQERLLNMRIEDIKPTGDPEVDKAQ
QIKLKAELARLARNIERREGREKAKGLHKSQTGEGGVTGGPGKGGATPRKCANCGEVGHI
KTNKKLCPLLNGQRKQNDTFKDANAASPATATVPATPSFAGSPS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcacaacccaacggcgagcagccacagcgacgcagcggaagatgaagac
tttgcaagaatcatgcgccaggcgcaaatgggggcggcggaaggcgaagaggacttgcta
agtggcatcgcctcgcgtccacttgaggctggcgagaaggcggatgatgccgtggattac
gaggatattggcgacgatgatctgcctgaagaagagtttgagtcgggcggaggcgatgat
gacgctggtatcaactttagcggaaccacaatgcaggactccggtggcacactcgataac
ggcgatgtggatatggatgatttgtttggcgatggcgatgcacaggatgaccttttcgga
gacgacccagatcattcggatcctacacgggaaaatacacagcacaaagacgacccactc
acatccatcgaagatctagtctcagaaggcttcagcgtggctggccaggacaagtcgcaa
cagagcagccgcaccaatgcacaaacggcgactcaggaggaagaggaagaggaggaagac
ccagaagtacgtgaacagctggctctcttcgcccaatctcttcgcaagaaggacgagttg
gcggatgcacctaaaaagacatcaagagaagaatttgagaagatttggcccaacttcgag
gcagacaaaccaccacgtttttttagcctcgtaccgcgaaaacgcgccttttacatccca
aaagttccgccaaaggcaccaaggccgttccagatgaacaaacttactctggatatcgca
ccagaccaggagaagagttttcgattacatcccacaaccaccgccaagtccggtcggcaa
caagaggaggagcaaggtggaatcatacaaatcacgagcactacagaagatgacggtgat
gggaacgagcagatggatttcgatcacttcgatacgattaacgatcacgaaatgattggc
aatgtatcatggagcgacctcagaattgcttgtgaggactgggaagttccagatgactca
aacgctgcaatcctttccgagaatggtcaagcaccaactccacctgatagtgtcaatgct
gggcagtcaccaaacaagaaacgcagactcggagaccacgaccagcccattcaattttct
gtgtacgatcacatggatttgcccacttgggacgaccctgagctggaaacagcgaagttg
tcaaagaagattctcttggatatgaacgaccctcatctcctgctggacgtacaacagccg
agtgcagagcctccaaagcctcgaacattgggtctgggactcaagcgtgatagtcgcggt
agtctcgcgaatccaatgttcaagcgctacaatatttccaatgatgaggcatatgacgcg
ctcaaagagagcagtcaacagaaggttcgtagtactattggacacatgaacgttgagcac
agtctgcccgcactcaagttgcagtatccgttctacaaggttgcactttctgatcgcgaa
cttcggtccttccatcggcccactattacgttcaagcctggtgagcgagccagtatctcg
tcactcaagtcagtcaaaaggaaacacaagaaaaacctcaaaccatcggaggccttcgcc
actgcagaggacctcaacattggtgacaactcagatctcctcctcgccgaatactcggaa
gagtaccctaccactttgtccaactttggcatgggcatcaagattctcaattactaccga
cggaaagacatggaagacacggcacgtccgaagccagaagatggaattggagaaacatcg
attctgttaccgcaggataagagtcctttctctctgtttggccaagttgagccaggccag
caggtattgacgctccacaacgccatgtatagagcgccagtgttcaagcacaagcctgaa
gagaccgatttccttgttagcagaagctggactggggttaatggccccagatactacatg
cggactattcccaaccttatggtggttggccagcagttcccatccgtcgaagtgcccggt
acgcatgcccgaaaggttactgaagcatcgaagaagcgactcaagatgctggcgttcaga
ttgtaccgaaagggacaacagagaggagcgcgacaaccttgggttagtaacgaaatgatc
aagcagcatcttccaggtactgaaattgcgcaaaatcgctctcgaatgcgcgaaatcatg
aagtaccagaaggacattggtacctgggagcctgtgcctggtgagactgtgcctgaagaa
ccaattctacgcacttggataaagccggaagacgtttgtcttattgactccatgcatgct
ggtgacaagcagcttcaggatgccggtatcaaatcgaatgagatccgtgatgacgatgat
gaagcagacaacgaaaacgctgatgtcaagttggcaccatggaacaccacgaagaacttc
ttgaacgcatgtgccggcaaggcgatgctggagcttcatggagaaggcgaccctactgga
caaggcttgggtttcagtttcatcaaggtctcgatgaagggtggctttagggatgttggt
gagagtgccgctgatcgacttgacagcaagaagatgaaggagcttggcggtcacagctac
aacgtacagcgccagcaggttatgtatgagaacgccatcaagcgtatctggaacaagcag
aaagagagtctgtctgctcagaacccgccttccgataccgaggacgatgtcgatacggcc
gtgcctcgcaacaatctcccacgccaacgctctgagatgggaacgccagctacaatgcgc
catgacgatgagacaatgtcacaaatgtctcgcaatagcaatgcagacaatcgcggcaag
aagctcaagatcacacgaactatcaagaacaaatacgacgagtatgaggacgtcacggaa
attatcacagatccagctgtcattcaactctacatcaagcacaagcgccaagagcgtctg
ctgaacatgcgtatcgaagatatcaagcccaccggcgaccccgaagtagacaaggcccag
cagatcaagctcaaggccgaacttgcccgtctggcccgcaacatagaacgtcgcgagggc
cgcgaaaaggcaaagggtctacacaaatcgcagacaggagaaggaggcgtaaccggtggt
ccaggaaagggtggagcaacacctcgcaagtgcgctaactgcggcgaggtgggccacatc
aagacaaacaaaaagctatgtcctcttcttaatggccagaggaaacaaaacgacactttc
aaggatgcgaatgctgcgtcaccggctactgctactgttcctgccactccttcttttgct
ggttcgccgtcttga
DBGET
integrated database retrieval system