Bipolaris zeicola: COCCADRAFT_34477
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Entry
COCCADRAFT_34477 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
bze
Bipolaris zeicola
Pathway
bze04138
Autophagy - yeast
bze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
COCCADRAFT_34477
04148 Efferocytosis
COCCADRAFT_34477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bze04131
]
COCCADRAFT_34477
Membrane trafficking [BR:
bze04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
COCCADRAFT_34477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_16
TPR_Vps41
TPR_19
Clathrin
TPR_8
ANAPC3
TPR_5
GyrB_insert
ANAPC8
Myb_DNA-bind_3
Motif
Other DBs
NCBI-GeneID:
19147764
NCBI-ProteinID:
XP_007709614
JGI:
34477
UniProt:
W6YK82
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MLSAFTARPIVELKQRDKSKIESILAYGDRVLVGLNTGSLRIYRVNDQAEDVEAEQQQNG
DQNGQPQQPPTPKPKPADLLREEEKFSRRPIQQLAIIKEANILVSLSDNYVSIHDIQTYA
LQEKLEKTRGATTFAAASNIVKDPSTGIPSIVSHLAVAVKRKIILWTWQDMELTGDAVEI
SLIASVKSLTWATGTKIVAGMDPGFVMVDIETQEVQDIIKPGALAENGSQGGARFGAVSS
SGMGYMGMGSWVPKPLATRLGEGEMLLAKDVNSLFIDTDGNALDKRQVPWQTAPETIAYS
YPYMLTLQPPSKGSLEIRNPDTLNLLQLIPLPNANFLHVPQPNISLAHAGKGFLVASDRC
IWRMGAQSYETQIDELVANGRYDEALSLLNMLEDTLLLDKEERIREIQILKAQALFDLKK
YREAMELFIDAKAPPERVIALYPRSIAGNLAPEESVKGDGSVTEEDETNGEKPAEESEET
TAPAAATIGRSMMGRFGVGGHKKVDSDTASIRAGAVKEEAAAEKGSIKKRTTDPAQTDKA
VSEKEFKDSVRALQSFLTQCRVQIKRYIDTEGNLKEPLPTPSGSQLEAEKPPFHIFIEET
SLQGPVDWKAKLLEVAQLVDTTLFRAYMIANPSVAGSLFRLPNFCEPDVVQEKLYETGRY
ADLIDFLHGKKLHRQALELLEKFGKNEADEEVSSALQGPQRTVGYLQALPPELIDLILEY
AEWPLRVNPELGMEVFLADTENAETLPRDRVLEFLQKIDLKLAVRYLEHIIEELNDLNVD
FHQRLVDLLLERLKRGDFANEEEKADWRERLQTFLKKGNAQYNRYRVFQQLPANDADYYE
ARAIVLSKMGSHKQALAIYVFQLKDYKKAEEYCNQVYTASPSSLPSNQSPKIGSPQIGSN
IQGTIEDTELSIYHVLLSLYLSPPPPHQPNWPPALELLSKHGARLPAATTLDLIPPSLPV
KDLESYFFGRIRNANSLLNEERIVSRLRGVEKVAVEAAMLLGNDNKVDQYGRKVPGGLNR
RVVIDGDRHCAVCHKRFGGSAIRVFPDNSVVHSGCMRGSVGKRTTGAAGWR
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgctctctgccttcactgcccggcctattgtcgagcttaaacagcgcgacaagtccaag
atcgaatcgatcctcgcatatggcgatcgcgtgcttgttggactcaacacgggttccttg
cgcatataccgtgtaaacgaccaggccgaagacgtcgaagccgagcagcagcagaatggt
gaccagaacggccaaccgcagcagcccccgacaccgaagcccaagcctgcggaccttctc
cgcgaagaagagaagttctcgcgccgacccatccagcagctagccatcatcaaggaagcc
aacattctcgtctcgctgtcggacaactatgtctcgatacacgacatccaaacgtatgcg
ctgcaggagaagttggagaagacacgaggcgccactacgtttgctgcggctagcaacatt
gtcaaggatccatcgactgggatcccgtcgattgtgagccatttggctgttgcggtgaag
cgaaagattatactatggacgtggcaggacatggagttgacgggcgatgccgtggagata
tcactgattgcgtcggtcaagagcttgacgtgggctaccggcaccaaaattgtcgctggc
atggaccccggcttcgtcatggtcgatattgagacacaagaggtacaagacatcatcaag
ccaggtgcacttgcagagaatggaagtcagggcggggcacgctttggcgcagtatcatct
tcgggcatgggatacatgggcatgggcagctgggtgccgaagcctctggcaacacgactt
ggagagggggagatgctgttggccaaggatgtcaacagcttgtttatcgacacggatggc
aacgcccttgacaagcggcaggtgccctggcaaactgcccctgagactattgcctactcg
tacccatacatgcttaccctccaaccgccttcaaagggaagtttggaaatcaggaatccg
gatacacttaacttgctacaactcatcccattgcccaacgccaacttcctccatgtaccc
caacctaacattagtctggcccatgcgggtaaaggtttcttggtcgccagtgatcgatgc
atatggcgaatgggagcgcagagttatgagacgcagattgatgaactagtcgctaatgga
cgctatgacgaggcgttgagtcttctcaatatgctcgaagacactctgcttctggacaaa
gaagaaagaatacgggagattcagatactcaaagcacaagcattgtttgatctgaaaaag
taccgcgaggcaatggagctcttcattgacgcaaaagcaccgcctgagcgcgtcattgct
ctgtatccaagatcgattgctggaaacctggcgccggaggagagcgtcaagggcgatgga
agcgttacagaggaggatgaaacaaacggggagaagcctgcagaggaatctgaagaaact
acggctcctgctgcagcaacgattgggcggtcgatgatgggccgatttggtgttggtggg
cacaagaaggtcgactcagacactgcctctatccgggctggtgctgtcaaagaagaggca
gcagcggaaaagggtagtatcaagaagaggacaacagatccagcacagaccgacaaagca
gtgtcggagaaggagttcaaagactctgtacgtgcgttacagtcattccttacacaatgc
cgtgtgcaaattaagcgctacattgacacagaggggaacttgaaagagcccctgcctacg
cctagcggtagccaactggaggctgagaagccgcctttccacattttcatcgaagaaact
tcactgcagggcccggtagactggaaggccaagctgcttgaagtggcgcagctggtagac
acgacactgttccgggcatacatgattgcaaatcccagtgtagcaggctcgctgttccgc
ctgcccaacttttgcgagccggatgtcgtccaggagaagctgtacgagacgggccggtac
gcggatctgattgactttttgcacggcaagaagctgcatcgacaagcactggagttgctg
gagaagtttggcaagaacgaggcggacgaggaggtttcgtctgcgctacagggaccacaa
cgtacggtgggctacctacaggcgctgcctccagagctgattgatcttattctcgagtat
gctgaatggccgctacgagtgaatcccgagctcgggatggaagtcttcctggcggatacg
gaaaacgcggagacgctgccgagagaccgggttcttgagttcttgcaaaagattgatctc
aaactggcggttagatatctggagcatattatcgaggagctcaacgacctcaatgtcgac
tttcaccagcggctggtcgacttgctgctggaaaggcttaagcgtggggatttcgcaaac
gaggaggagaaggcggattggagggagagattgcagacgtttttgaagaagggcaatgca
cagtacaaccggtatcgtgtgttccagcagcttccagctaacgatgcggattactatgaa
gcacgcgccattgtgttgagcaagatgggatcgcacaaacaagcactggcaatctatgtg
ttccagctgaaggactacaagaaagccgaggaatactgcaaccaagtctacacagcatca
ccatcgtctctcccatccaaccaatcgccaaaaatcggatcaccacaaattggatcaaac
attcaagggacgattgaagacactgagctgtcgatatatcacgtgctcctatccctgtat
ctttcgccgccacctccgcaccaacccaattggcctcctgctctcgaactgctctctaag
cacggcgcacgactcccagcagcgacaactctggacctgatcccgcctagtttgcccgtc
aaagacttggagtcgtacttctttggtcggatccgcaatgcgaactcgcttctcaacgaa
gagcgcattgtttcgcggctgcggggggtggaaaaggtggcagtcgaggcagcaatgcta
cttggaaacgacaacaaggtggaccagtacggacgcaaggtgccgggtggattgaacaga
cgagtggtgattgacggggaccggcattgtgccgtctgccacaagcggtttggtggaagt
gcgattcgcgtgttcccagacaacagcgtggtgcacagcgggtgcatgcggggcagcgtg
ggcaagagaacgaccggggcggcgggatggcggtga
DBGET
integrated database retrieval system