Bipolaris zeicola: COCCADRAFT_34811
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Entry
COCCADRAFT_34811 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12822
RNA-binding protein 25
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_34811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_34811
Spliceosome [BR:
bze03041
]
Complex A
U1 snRNP components
U1 related factors
COCCADRAFT_34811
Complex B
COCCADRAFT_34811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
19147845
NCBI-ProteinID:
XP_007709987
JGI:
34811
UniProt:
W6Y7V0
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MYGYPGAPGYNGPPGYAGAPPGMAPPGMGPPGAAAPPGVAPPPGVANAQMPPAANGSRAL
PSGWQPPASMPNFNFNAPVIRLGTQGGRPGAADSPVGGRRDNAAPPARRGLGMDRDGDRR
DGPQPVNPPTREEIARTIFVGNIPDGVGGDEGMEHILETAGKLVRWTRATDANNKPQTFG
FAEFADAQSLETAAEIFKDIHVPTKRQKPGGAAKKEDGEEEEVETTKLHIMVDDASIKYA
EEWSKTRNEDEATVQFRLDSAKEALSSVLASFFNPPNAPNMDYAGDTVMQDAPTQDGEDV
EVAFVNLATGEDELADIPAEMREVVAAEIAAFRDRSNQRDRDRLRREEELEAEERRRSGR
RATPPSSAPSGPGNANGVPLGPRAERGVQGAPSGPKGSQFPRDYQAGVNFVNGGAVNNGV
YISREDDDDSASDSELERRRQKKRNDEAEEAYKKQLHRWLNTERRTVASLDRTNDYFKNM
DAECEKARVAQAKQLREFDDDQEAASRRDLYYRDHSDWIREREKVRGLEAKEDAIDRDQE
RREMAAQKRQQDHARGQADAFLEEQGEELMRREEQREPAHFKISLGAAAKKLEQTAAPRR
TAADVENLLEDEDLTDQAGSKKRTLIPINFDAAVRANLTQEEIEEAQRQLARDIPNDKEG
LWNWAVSWEHLPEKNINKDIKEWAANKVLEIMGVQEEMLVDAIVEHLKSRGAPQPLVENL
EVALDEEAEALVKKLWRMVIYYSETEKRGIK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtacggttatcctggtgctccgggctacaatggacctccaggctatgcaggagctccg
cctggcatggcccctcctggaatgggtcctccaggcgctgcagctccccctggtgtagca
cctccgccaggtgtcgcaaacgctcagatgcccccagcagcaaacggatcccgcgccctt
ccatccggctggcagccacccgcaagcatgccaaacttcaacttcaacgcgcccgtcatc
cgtctgggaacacaaggaggtcgtcctggcgcggccgacagcccagtaggcggccgtaga
gataatgcagcaccacccgctcgtcgcgggcttggtatggacagagatggcgatcgccga
gatggaccccagcccgtcaatccacccactcgcgaggaaatcgccaggaccattttcgtt
ggcaacatcccggatggcgttggaggtgatgagggcatggagcacattctcgagacggca
ggaaagttggtccgatggacgagggcaaccgatgccaacaacaagccccagacattcggt
ttcgcagaattcgccgacgcgcagagcttggaaacagcggcggagatcttcaaagatatc
catgtacccacaaaacgccagaagcctggaggcgcggcaaagaaagaggatggcgaagag
gaagaggttgagactaccaagttgcacatcatggttgacgatgcctcgatcaaatatgcc
gaagagtggagcaagactcgaaacgaagatgaggctacggttcaattccgccttgatagc
gcaaaggaagccctttcctcggtcctcgcaagcttcttcaacccacctaatgcgcccaac
atggattacgcaggcgatacagtcatgcaagacgcgccgacacaagatggcgaggatgtc
gaggttgcgtttgtcaaccttgctactggagaggacgaacttgcagacattccagccgaa
atgcgcgaggtggtcgccgccgagatagccgccttccgcgaccgttccaaccagcgcgac
cgcgaccgtctaaggagggaagaggagcttgaggccgaagaacgtcgccgcagtggtcgg
cgcgcaacaccaccatcctctgctcctagtggacctgggaatgctaacggtgtaccattg
ggtccgagggcggaacgaggtgttcagggtgcccccagcggacccaaggggtcgcaattc
cctcgcgattatcaagctggcgtcaattttgtgaatggcggtgccgtgaacaatggcgtc
tacatttcccgggaagatgatgatgattccgccagcgactcggaacttgagcgccgccgt
caaaagaagcgtaacgacgaagccgaagaagcgtacaagaagcagcttcatcgatggctc
aacacagaacgccgtactgtggcctcgcttgaccgtacgaacgactatttcaagaacatg
gatgctgagtgcgagaaggctcgtgtcgcgcaggctaagcagctccgagagtttgatgac
gatcaagaagcagcttccaggcgcgatctatactaccgtgatcatagcgattggatccgt
gagcgcgaaaaggttcgtggcctcgaagctaaggaagacgctatcgatcgagaccaagag
cggcgtgaaatggctgcccagaagcgacagcaagaccatgctcgtggtcaagccgatgct
ttcttggaagagcaaggcgaggaactgatgcgcagggaggagcaacgcgagccagcgcat
ttcaagatctctctcggtgcagctgccaagaagcttgaacagactgcggctcctcgtcgc
accgcagccgacgtcgaaaaccttctcgaagacgaagatctcaccgaccaggccggttcc
aagaagcgaacgcttattcccatcaacttcgatgctgctgttcgcgccaatcttacccaa
gaagagattgaggaagctcagcgacagcttgcgcgtgacattcccaacgacaaggaaggc
ttgtggaactgggcagtctcttgggagcacttacccgagaaaaacatcaacaaggatatc
aaagaatgggccgccaacaaggttcttgagattatgggtgttcaagaagaaatgctcgtc
gatgctattgttgaacacttgaagagcagaggcgcaccacagcctttggtggagaatttg
gaagttgcccttgatgaggaagcagaagctctggtcaagaagctttggcgtatggtcatc
tactacagtgagactgaaaagaggggaattaagtag
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