Bipolaris zeicola: COCCADRAFT_35656
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Entry
COCCADRAFT_35656 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bze03009
]
COCCADRAFT_35656
Ribosome biogenesis [BR:
bze03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
COCCADRAFT_35656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_LRRK2
Nbas_N
Beta-prop_Vps41
Gryzun-like
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_2nd
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
19148055
NCBI-ProteinID:
XP_007710955
JGI:
35656
UniProt:
W6YGQ9
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MLTEQFVAAISASTKPNTGVLKDAGIFVHEFQPLAAQRQVLKKSATAPNGIAVSATHVFA
AQSEKAVVHVYNREKGNQEALVPFPERIHSIALAAHDSVLLAGTESGRVLAWEISSGRLV
STSTSHLQPVTCIVVDPSSNFFLSGSSDAMIHVWALPSILSFSPDASRSPVHTLSTHRGP
ISSIACGHSSSSANIAVSISGDKSAIVWDYQNGQALRTYLLPEIPTAVTLDPADRAFFVA
YTDGSLQTIDFYDEVQKTTSVNVLRDSALSHRPIQPSSKTRFSADSQKLGGALSLSLSWD
GTTLISGHASGKIASWDVAKSNYLSSPANLPGPVSNLQFLAPTGFPNAHEPTFTIQAIVK
PKQDTGLASSGNGLVPPHYTLSMQLTGRLRSAHLSASEQGRAGKSEFEEALTHPSFPTSM
LEESLAELNSWGTQARATVAPAANFMALDTDDAGASGTTGNAQQAEVKELKKQLASLQRI
QKVTFSQLSELREENDYFVAQEKKRAERAKTQAKRKTNGAKHSLDTADVEMNDGTDATSD
SGLSDARADEKP
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgaacaattcgtggccgctatatcggcttcgaccaagccgaatactggagtt
ctcaaagatgcgggtatttttgttcacgagttccagccgctggctgctcaacgacaggtc
ttgaaaaagagcgcgactgcgcccaatggcatcgccgtgagcgctacacacgttttcgcc
gcgcagtcggaaaaggcagtagtgcatgtgtataatagggaaaaaggcaaccaggaagcc
cttgtgcccttcccagagagaatccatagcatcgcgctggcagcacatgatagcgtgctg
ttggctggaacagaaagtgggcgagtactagcttgggagatcagctcaggccgcctcgtc
tctacctctacttcgcatctccagccagtgacgtgcattgtcgttgatccatcctccaac
ttctttctctctggctcctccgatgccatgattcacgtatgggccctgccctcgatactt
tccttctcgcctgatgcctcgcgctcccccgtacataccctctctacccaccgcggtccc
atctcttctattgcctgcgggcacagttcaagtagcgccaacattgccgtatctatatcg
ggtgacaagtctgctattgtatgggactatcaaaatggacaagcgctacgcacatacctg
ttaccggagatacccactgccgtcacccttgatcctgccgatcgcgcattctttgttgcc
tacaccgacggtagtttgcagacaattgatttctacgacgaggtgcaaaagactacctcg
gtaaatgtccttcgtgacagtgctttgtctcaccgccctatccaaccctcgtccaagacc
cgattcagtgccgattcgcagaagctcggtggagccctcagcctgagtttgagttgggat
ggcacaacgctcatctctggtcatgcaagtggcaagattgcttcttgggacgtcgccaag
tcaaactatctttcaagtccagccaatcttccagggcctgtctcaaatttacagttcctt
gcccccacaggctttcccaacgcacatgaaccaacgttcaccatccaggccattgttaaa
ccaaaacaagacaccggacttgcaagcagcgggaatggcttagtgccaccacattatacc
ctgagcatgcagctgacgggtcggctacgcagcgctcacttgtctgctagtgagcaagga
cgtgcaggaaaaagcgagtttgaagaggccctcacccatcccagttttcctactagcatg
cttgaggagagtctagccgaattgaactcttggggcactcaggccagggccactgtcgct
ccggcagccaacttcatggccctggacacagatgatgcaggtgcctccggaactacaggc
aacgcccagcaagccgaagtcaaagagctcaagaaacaactggcaagcctccagcgcatc
cagaaagtgaccttttcgcagctttcagagctgcgtgaggagaacgattactttgtggcc
caagagaagaagcgggcagaacgtgccaagacacaagcaaagaggaagaccaatggcgcg
aagcatagccttgatactgcggacgtggaaatgaacgacggcaccgacgccacttccgac
tcagggctgagtgatgctcgggcagacgaaaagccttga
DBGET
integrated database retrieval system