KEGG   Bipolaris zeicola: COCCADRAFT_35805
Entry
COCCADRAFT_35805  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
bze  Bipolaris zeicola
Pathway
bze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCCADRAFT_35805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bze03041]
    COCCADRAFT_35805
Spliceosome [BR:bze03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    COCCADRAFT_35805
 Complex C
   U5 SnRNP specific factors
    COCCADRAFT_35805
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR75_2nd PEP5_VPS11_N Beta-prop_WDR35_TULP_N VPS11_N Beta-prop_BBS7 NHS
Other DBs
NCBI-GeneID: 19148110
NCBI-ProteinID: XP_007711129
JGI: 35805
UniProt: W6Y490
LinkDB
Position
Unknown
AA seq 359 aa
MSREKRPANEAFGTSQLVKRTKSDANLGGSSAVAVVNGSSANGALIQAGSRSSALQSPVM
ELTGHSGEVFAARFDPTGQCIASGSMDRSILLWRSSDTCENYGILTGHKQAVLDLHWSRD
SKVLFSASADMHLASWDVETGERIRRHPGHEEVINCMDVSKRGEEVLVSGSDDGYIGIWD
TRTKDAVTFIQTDFPITAICLAEAGNELFTGGIDNDIKVWDLRKQAVTYTLIGHTDTVTS
LQMSPDNQTLLSNAHDSTVRTWDVRPFAPSDRRIRTYDGAPTGQERNLLKASWDFKGEKI
AAGSGDQSVAVWETRTGKLLHKLPGHRGAVNDVRFHPLGEPVLVSASSDRKVMVGELGK
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtctagagagaagcgacccgccaatgaggcttttggcacaagtcagttggtcaagcgc
accaagtcggatgccaacctgggaggaagctctgcagtagctgtagtcaacgggtcgagc
gcaaatggcgccctcatacaagcgggatcgcgatccagcgcactgcagtcgccagtcatg
gaattaacgggtcactcaggcgaagtgtttgcagcacggttcgatccgaccggacagtgc
atcgcttctggctccatggaccgttctatattgctttggcgtagctccgacacttgcgaa
aactatggcatcctcactggtcacaagcaggcagtactcgacttgcactggtcacgcgat
tccaaagttctcttctccgcatcggcagacatgcacctagcaagttgggacgtcgaaact
ggagagagaatacgaagacatccaggccatgaggaggttatcaattgtatggatgtgagc
aagcgcggcgaagaggtgctcgtgagcggttccgacgacggctatattgggatttgggac
actagaacaaaagatgccgtaacctttatccagacggactttcccataacagcaatatgc
ctagcagaagctggaaacgagctattcacaggcggcattgacaacgacattaaagtctgg
gatctgcggaaacaggcagtgacatacacattgattgggcacacggatacagtgacttca
ctccaaatgtctccagacaaccaaacactattatccaacgcacacgattcgactgttagg
acatgggatgtaagaccctttgctccctctgaccgacgcatacgaacgtacgatggagcc
cctactggccaagagcgcaacctcttgaaggcaagctgggacttcaagggcgaaaagatt
gcagctggtagcggggatcagagcgtggccgtttgggagacacgaacagggaaactcttg
cacaagctgccaggccaccgaggcgccgtcaatgacgtgcgtttccaccctcttggcgaa
cccgttttggtctccgcctcctccgaccgaaaggtcatggtaggcgagctcggcaagtga

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