Bipolaris zeicola: COCCADRAFT_39409
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Entry
COCCADRAFT_39409 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
bze
Bipolaris zeicola
Pathway
bze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCCADRAFT_39409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_39409
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
COCCADRAFT_39409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP-eEF1A_C
Roc
Ras
TraH_2
CysA_C_terminal
Septin
Motif
Other DBs
NCBI-GeneID:
19148990
NCBI-ProteinID:
XP_007715343
JGI:
39409
UniProt:
W6XYI4
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MPPKSGFSRTRNVDYDDDDFYDDDYYEEEGDDGGAGDGMSEEDKEQMRVGTIRVREAMGD
MSDFTSDEQIQEALWHYYYDVGKSVSYLKNKLGIAEPKKEAPKQEKAKPASRFDQAASVA
HQNAPASTGKQTHMRSSYGHQPARLVAHYLLLPPLSMPTNAAVTDFFWDVPWGNVPPERL
ANITIEAPEYKGGLLGGSSKLAALAAKRRKEREEAEAAASKANSDADSAVAMLDKLSVKN
QENVNPLHDAAASRPARVSKYPVRRRSPSPAPETPKEPEIEEPQLPQPAIVVESPAQRAV
ASMFASTLCGSDKSSKQPQLQVQELPVPFAAYRSFDGTKVFSEPSPDDIKKKQTNGDLTE
SVEKLSVADEPKVKSKNLNVVDEFEKSNMKRLANFVVVGHVDHGKSTLMGRLLYDLKVID
QRSIDKLRKEAETIGKSSFALAWVMDETSEERSRGVTVDIATNYFETEKTRFTILDAPGH
KDFIPNMISGASQADFPVLVIDASTNSFESGLKGQTKEHIMIARSMGMQHIIIAVNKMDM
IGWSKSRFDEIAKRMTAFLTEASFLEKRITFIPLAGLTGENVVKKIENSAARWYTGETLL
EALERIEIPQRNLQKSLRLSVADVFKGDMRSPLSISGRIDSGTLQVGDVILALPANETAT
IKSIEVQDAPVDWAVAGQIPTLHLTDIDPVHLRQGDIICTPKDPVKLVKAFTSKLLAFEH
VLPMPVEVFRSTLNSPGSIRTLSARLNKFTGEVMKKKPRIVKPGEVARIVVQLERELPIE
EGMRVVLRERGRTVGAGLMENVA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaaaagcggtttctcgcgcacgcgcaacgtcgattatgatgatgatgacttc
tacgacgacgactattacgaggaagaaggcgatgatggcggcgcaggagacggcatgtcg
gaagaagacaaagagcagatgcgcgtcggcacaatacgggtgcgtgaagccatgggagac
atgagcgacttcacaagcgacgagcaaatacaagaagctctatggcactactactacgat
gtgggaaagagtgtgagctacttgaaaaacaaattgggaattgcagagcccaagaaggag
gctccgaaacaagaaaaggctaaaccagcatcgcggttcgaccaggctgcaagcgttgct
caccagaatgcgcccgcatctacaggtaagcaaactcacatgaggtctagctatggacac
cagcccgctcgtcttgttgcccattacctactgctgcccccactgtcgatgcctaccaac
gctgctgtcacagacttcttctgggatgtgccttggggcaatgtgccacccgagcgacta
gcaaatatcaccattgaagccccagagtacaaggggggattactcgggggctcttcaaag
ctagctgcgctcgcggctaagcgcaggaaggagcgagaagaagccgaagctgctgcctcc
aaagccaatagcgatgcggactcggctgttgcgatgctcgataagctttcggtcaagaat
caggaaaacgtcaaccctttgcatgacgcagctgcaagtcgcccagctcgagtatccaaa
taccctgttcgaagacgatcgccttctccagcaccagaaacaccaaaggagcccgagatt
gaagagcctcagctccctcaaccggccattgtcgtcgagtctccagctcagcgtgctgtc
gcttccatgtttgcttcaactctctgtggttccgacaagtcgtcaaagcagccgcagctc
caagtccaagagcttcccgtgccatttgctgcctacaggtcatttgatggtacaaaagtc
ttctcggaaccaagtccggacgatatcaaaaagaagcagactaatggcgatcttactgag
tcggtcgagaagctctctgttgccgatgagccaaaggttaagagcaagaacttgaatgtt
gtggatgaatttgagaagagcaacatgaaacgacttgcaaattttgtagttgttggacat
gtcgaccacggcaagagtacactcatgggccgtttgctgtacgacctcaaagtcatcgac
cagcgatcaatagacaagctacggaaggaagccgagactatcggaaaatcgtcttttgca
ttggcctgggtgatggatgaaacaagcgaagaaagaagccgtggtgttacagttgatatt
gcgacaaactacttcgagacagagaagacacgattcacgatattagatgctcctggccac
aaggacttcatcccaaacatgatatcaggggcatcgcaggccgacttccccgtcctggtg
attgatgccagcaccaacagtttcgagtctggcctcaagggtcaaaccaaggaacatatc
atgattgcacgaagcatgggcatgcaacacattatcattgctgtcaacaagatggacatg
attggatggtctaaatctcggttcgacgagatagcaaaacgtatgacggcgttcttgact
gaagcaagtttcctggagaaacgaatcacctttatcccgctggcgggtcttacaggcgag
aacgtcgttaagaagattgaaaactctgctgctcgttggtatactggcgaaacattactc
gaggccctagagcgcatcgaaataccacaacgtaacctccaaaaatcacttcgcctttct
gtcgccgatgtattcaaaggcgacatgcgctcaccgctcagcatatccggacgaatcgac
tctggaacactacaagtaggcgatgtaatcctcgcgctccccgccaacgaaactgcaact
ataaaatccatcgaagtccaagacgcccctgtagactgggcagtcgcaggccaaatcccc
acactacacctcacagacatcgaccctgtacatctccgccagggcgacattatctgcacc
cccaaagacccagtcaaactcgtcaaggcatttacatccaaactcctggcttttgaacac
gtgctgcccatgcccgtggaagtttttcgcagcaccctcaactcgcctggtagtatccgc
acgttgagtgcccgtctgaacaagttcacaggcgaggtcatgaagaagaagccgaggatt
gtgaagccgggtgaggtggcacgaattgtggtgcagttggagagggagttgccgattgag
gagggtatgagagttgtgcttagagagagggggaggacggttggtgcggggcttatggag
aatgttgcttag
DBGET
integrated database retrieval system