Bipolaris zeicola: COCCADRAFT_39616
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Entry
COCCADRAFT_39616 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
bze
Bipolaris zeicola
Pathway
bze03082
ATP-dependent chromatin remodeling
bze03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCCADRAFT_39616
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCCADRAFT_39616
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bze01009
]
COCCADRAFT_39616
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_39616
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_39616
Protein phosphatases and associated proteins [BR:
bze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
COCCADRAFT_39616
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
COCCADRAFT_39616
SWI/SNF complex
COCCADRAFT_39616
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
COCCADRAFT_39616
PBAF complex
COCCADRAFT_39616
SWI/SNF complex
COCCADRAFT_39616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
TFIIA_gamma_N
Motif
Other DBs
NCBI-GeneID:
19149046
NCBI-ProteinID:
XP_007715595
JGI:
39616
UniProt:
W6YFT5
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MLSPPTADSQTLDSSTAQQQQHGASTTSSSSTTTTNGTSGDGAVQPPNAPPPSINGADIA
SAENNAIRDGKQKAKAVMAASGLNLTPTHGDTASPAHTDAINGASPSRKRSRSGTRKSSR
TPSHDDGAQPTALQKQLLDRYIARDLLDSVNKYERNKHSEKVYGQLNDLRHFYRDEVYPV
RRQNPGAIFGYGYAGYGNGVTDIPPDPRDPRALPQTKLLYPEHAKRAGRRLAPQLKIPRD
KIAQQAEQIEELVPVRLDIELDRLKLRDTFTWNLHDRVTNPLLFAQTLVEDFQIPPELRQ
NVMQQIDREIHEQVQDYYPHAFFDDEPLDPHLPYSAYKNDEMRISIKLNITIGQHTLMDQ
FEWEINNPLNAPEEFARQMAADLSLSGEFTTAIAHSIREQCQMFTKSLYITGHPFDGRPV
EDADIQDNFLPSPLPSVFRPMQATKDYQPYLYELSNADLERAELSIMREQRRQKRSVNRR
GGPALPDLKDRQRTVRTLVVSSVLPGAAETIEESQLFKATRKAREGRRRAEGSSDESDSD
ESVLESPAPAQLTGGTARTRGMRGAATAAQAAMRSAIGRSATPEVSTLQPHHEPRTARSL
RYETREESVSESTSLIVKLRISSAKLKEWQANPKAFAKPASTPMMAPSQTPARNTPTANS
MPPPPSPSPALPSRSTPTAPPSVEASPRLSTTSTPAASNEQRQYRPDGSMEAPWPAPPVS
QHPPPPPWLQQGLQDLRDRNPGELFESTMRYAVMNEAAEDPKTGAVAPKQVRIDTLAPGA
PLPANHKAYFLPRIRCMDCPGKLYNAGPEQTVNNFELHLKNRAHTENVRKRTGQ
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctccgcccacagccgactcccagacgctcgactcgtccaccgcccagcagcaa
cagcacggcgcgtccaccacttcctcctcctccaccaccaccaccaacggcacctcgggc
gacggcgccgttcagcctcccaacgcccctcctcccagcatcaatggagcagacatcgcg
tccgccgagaacaacgcgatccgagacggaaaacaaaaggccaaggccgtcatggccgcc
tctggcctcaacctgacgcccacccacggcgacacggcatcgccagcacataccgacgcc
atcaacggcgcgtcgcccagtcgaaagcgatcgcgttcaggcacccgcaagtcgtcgcgc
acaccctcgcacgatgacggggcgcaacccacggccttgcagaaacagcttctcgatcgc
tacattgcgcgcgacctgcttgacagcgtcaacaagtacgaacgcaacaagcattccgag
aaggtatacggccaactaaacgacctgcgtcacttttaccgcgacgaagtctatcctgtg
cgccgccaaaaccccggcgcaatttttggctatggctatgccggctatggcaacggcgtg
actgacattcccccggaccccagagatccccgcgctctcccgcaaacaaaattgctatat
cccgaacatgccaagcgcgctggccgtcggctcgcgccgcaattgaagatcccgagagac
aagatagcgcagcaggcggagcagattgaagagctggtgcctgtgcgtctggacattgaa
ctggacagattgaagctccgagacacgtttacctggaacctgcacgaccgcgtcacaaac
cccctcttgttcgcccagacgctcgttgaagacttccagataccacctgagctgcgccag
aatgtaatgcagcagattgatcgcgagatccacgaacaggtccaggactactaccctcat
gccttctttgacgacgagccattggacccccacctaccatactccgcatataagaacgac
gagatgcggatatcaatcaagttgaacatcaccattggccagcacactctcatggaccaa
ttcgaatgggaaatcaacaacccgctgaatgcacctgaggagtttgcaagacagatggct
gcggacctgtccctgtccggagagttcaccaccgccattgctcattccataagggaacaa
tgtcaaatgtttacaaagagtctatacattacagggcatcccttcgatgggcgccctgtg
gaggatgctgacattcaggacaacttcttgccttctccactcccctccgtcttccgccca
atgcaggcaaccaaggactaccaaccctacctgtacgagctgagcaatgcagacctggag
cgcgccgagctctccattatgcgcgagcagcgacgccagaaacgatcagtcaatcgccgc
ggtggcccggcactaccagatctcaaggatcgacaacggactgtacgcacactggttgtt
tcgtcggttctaccaggagctgcagagaccatcgaagaaagccagcttttcaaggcgaca
aggaaagctagggaaggccgtcgtcgcgctgaaggcagttcagacgagtctgatagcgat
gagtctgtgctggaatcacctgctcccgcgcagttgactggaggtactgcccgaactcgt
ggtatgcgtggagcagctaccgccgctcaagccgccatgcgttcggccattggccgatca
gcaacacctgaagtgtccactctccagcctcatcatgagccgcggacagccagatcgctc
agatatgaaacacgcgaggagagcgtgtctgaatcgacttcactcatagtcaaacttcgc
atctcatcggccaagttgaaagagtggcaggccaatccaaaagcattcgcaaagcctgct
tccaccccaatgatggcaccatcgcaaacgccggcacgaaatacacctactgcaaactca
atgcctccaccaccatcaccatcaccggctttgccttctcgctctactccgacagcgcct
ccatctgtcgaagcatcaccccgcctgtccacaacttccacaccagctgcttcgaatgag
caacgacaatacagaccagatggctcaatggaagcaccttggcctgcgcctcctgtctca
caacatcctcccccacctccgtggctccaacaaggattgcaggatctccgtgaccgaaat
cccggtgaactcttcgaatccaccatgcgttatgcagtcatgaacgaggccgcggaagat
cccaagaccggcgccgttgctcccaagcaagttcggatagatacacttgccccaggtgca
ccactgcctgcgaaccacaaagcatacttcctacctcggattcgatgcatggattgccct
ggaaagctgtacaatgcaggtcccgagcagacagtcaacaatttcgaactccatctgaag
aatcgggcgcatacggagaacgtacgaaaacgaactggtcaatga
DBGET
integrated database retrieval system