Bipolaris zeicola: COCCADRAFT_40017
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Entry
COCCADRAFT_40017 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_40017
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
COCCADRAFT_40017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_GCN1
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
ARM_TBCD_2nd
ResIII
CLASP_N
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
19149149
NCBI-ProteinID:
XP_007716069
JGI:
40017
UniProt:
W6XWM3
LinkDB
All DBs
Position
Unknown
AA seq
1937 aa
AA seq
DB search
MSATRLDRLVTLLETGSTALIRNTAADQLADVQKQHPDELFNLLTRVIPYLRSKSWETRV
AAAKAIGGIAANADKFDPNADDDDADESSKSSLKSESNHNVKSEDSNGAVKKEENSDAAL
PPLSHGLDLATLDLPSILKFGKVLASSGAKEHDYKLAAMDPAERLEYQKSTLLKRLGFEG
PWTEDLSPPHEIMPQTPGPKTPAPNRIDTNVPRADSSNLASSPPPALATPNGQGLSKRQQ
NALKRKQKKNAAGGANKVQIVDFNANSRKDSQSDAVETPSRPHPIALKLEKTENGEEGDS
GVNDYFSLERNGGDDDAKFVKEFKGAPVPEKSSFQAEAVEAGLEWPFERVCSYLAVELFD
FTWEVRHGAAMGLREILRVHGAGAGRRKGLTRAENDQLNQQWLNDLACRMICIFMLDRFA
DFTGDNVIAPIRETAGQALGSLLQYMTGDNVLATFRVLNRLIMNQDLPVDTNPLSAPWAL
CQGGMIGLRYLVAVRNDLLLQDGTLMDGVLAAVTNGLSNDDDDVRAISAATLIPVVKEFI
EMRPKALEGLMNVVWSCLSSLQDDLSASTGFIMDLLAKLCGFPQVLEAMQANARQDPSQS
FHELVPRLFPFLRHTITSVRAAVLRALITFLNIQSQESDGWIDSKALQLIFQNILLERNE
GVLKLSMQLWNAVVASLGSQLPNHLEPVLDAIVPLTLTPIGVSRHPISLDKSLLIKPSGQ
AMGPPPNTETSRKSTPPDGAEPAQKRRKKSRPGKDDMAIPAPSSQSHNVDGHMITGDLEL
IGADVMIRSRTSAAQALGTAMGAWPEESRLQAFKSRLVSPLSSPNSTTQLTAAIIIEEFG
KNLKAKDALAELFVQHLLPMVEGERPLAYEDLVPKLQIVRTQCSSLLHIFQEAHVQNLPN
LSTIVQGLPFTNNYAFGVADAEKLVTVQYEKLKKAMTPSSRMIAAANLETTRKEVEASIQ
EAKNIKEERDIRIKAAAAGALVALDSPPKKPSPPIKAMMDSIKKEENVELQKRSAAAVAG
YIVHLVNGKRSGVVNKVVGNLVKFYCMETAETPEFAGQSHIETGILTLKKDEDVRDHPDA
ARFAEESRAARITKRGAREGLEQVVERFGAEVFEKVPILKDLIERPIKEAFTEASLPPQI
FNEDGVFGQEVVDGLSTLRALVGKLHPSVRSFVKELLPLIARALQSKLYVLRYAAAKCFA
TICSVMSVEGITMLVESVLPTISDGGNVHARQGAIECIYHLIHVMDDAILPYVIFLITPV
LGRMSDSDNDVRLLATTSFATLVKLVPLESGIPDPPGLPDSLLKGRDRERKFVAQMLDAK
KVEPFEIPVGIKATLRSYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCMVASDHHM
RADEFAKSGDPNFRRLPSLIVCPPTLSGHWQQEIRQYAPFLSCVAYVGSPPIRSQYRNDL
DKVDIVITSYDICRNDADILKPINWNYCVLDEGHLIKNSKSKTSQAVKQFQSNHRLILSG
TPIQNNVLELWSLFDFLMPGFLGTEKVFQERFAKPIAASRFAKSSSKEQERGALAIEALH
KQVLPFLLRRLKEEVLDDLPPKILQNYYCDLSELQRNLFDDFTKRQGKEIQSKAGNADRE
SKQHIFQALQYMKKLCNSPSLVVKGPTNKAYESTQQYLKKHNTTIDDIAHAPKLGALKDL
LVDCGIGASDVVSDKSANANGDLPEAVSQHRALVFCQMKEMLDMVQHNVLEKLLPSVQFM
RLDGGVEATKRQEIVNKFNTDPSYDVLLLTTSVGGLGLNLTGADTVIFVEHDWNPQKDIQ
AMDRAHRIGQKKVVNVYRIVTRGTLEEKILNLQRFKIDVASTVVNQQNAGLQSMQTDQIL
DLFNVSADSNDPSALPAPPSNAKDDGTGIDENDAVDATGALREKGKKGFLDELGDLWDEK
QYDEEFDLDGFLGKMKA
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaccagattggaccgtctcgtcacgctcctcgagactggcagcacagcattg
atccgcaacacagcagccgaccaacttgctgacgtccagaaacaacatcccgatgaactg
ttcaacctcctcacccgtgtcatcccttacctgaggtcaaagagctgggagactcgagtc
gctgccgccaaggccattggcggcattgccgctaacgccgacaagtttgatcccaatgct
gatgacgatgatgccgatgaatccagcaaatccagcctcaagtccgagtcgaatcacaat
gtcaagtccgaagatagcaatggcgccgtcaagaaagaagaaaacagcgacgctgccctg
cctcccctctcccacggactcgatctagctaccctcgacctgccctccatcctcaagttt
ggtaaagtcttggcttcctctggtgcaaaggagcatgactacaagctggctgccatggac
cccgccgagcgcctggagtaccagaagagtaccctcctcaagcgccttggcttcgagggt
ccatggaccgaggacctctcaccaccccacgaaatcatgcctcaaacacccgggcccaag
acgcctgcaccaaatcgcatcgacacaaatgtcccacgtgccgacagctcaaatctagcc
tcttctcctccccctgcattggccacgcccaacggccagggactaagtaaaaggcagcaa
aacgccctcaaacgcaagcaaaaaaagaatgctgccgggggtgctaacaaggtccaaatc
gttgattttaacgcaaactcacgcaaagattcacagtcagatgcagtagaaacccccagt
cgcccccatccaattgcccttaagctcgaaaagaccgagaacggcgaggaaggcgacagt
ggtgtaaacgactacttttcgctcgagcgcaacggcggagacgacgacgcaaagtttgtc
aaggagttcaagggcgcgcccgtacccgaaaagtcgtcgtttcaggccgaggctgtggag
gctgggctagaatggccattcgaacgtgtgtgttcgtatcttgctgtcgaactttttgac
ttcacctgggaggtccgtcatggggctgccatgggtcttcgagaaatcctccgtgtgcac
ggcgccggcgccggcaggcggaaagggctcactcgagccgagaatgatcagctcaatcaa
caatggctcaacgacctagcgtgtcgcatgatctgcatcttcatgctcgatcgctttgca
gacttcactggtgataatgtcattgcaccaatacgtgaaactgcaggacaagcactcggt
tccttgctgcaatacatgactggcgacaatgtgctggcaactttcagagttctcaatcgc
ctaatcatgaatcaggacttacctgttgacaccaaccctctcagtgcaccctgggccctt
tgccagggtggcatgattggcttgcggtaccttgtcgctgtgcgaaacgatctgctcctt
caagatggtactttgatggatggtgtgctcgctgcagtcaccaatggcctgagtaatgac
gatgatgatgtacgagccatcagtgccgcaacgctaatccccgttgtaaaggaattcatc
gagatgcggcccaaggcactcgaaggattgatgaatgtcgtctggtcatgtctctccagc
ttgcaggatgatctcagcgctagcaccggtttcatcatggacttgctggctaagctctgc
ggtttccctcaagtgctcgaggcaatgcaagcaaacgctcgccaagacccaagccagtca
ttccacgagctcgtccctcgcctcttccccttcctacgacataccattactagcgttcgt
gcggctgtgttgcgtgcactaatcacattcctcaatattcagagccaagaatcagatggc
tggatagacagcaaggcgttgcagttgatattccagaacatcttgctcgagcgcaatgaa
ggcgttctgaagctctcaatgcagctttggaatgccgtagttgcaagcttgggtagtcaa
ttacccaaccatctggagcccgtattggatgcgattgttcccctcacccttacccccatc
ggagtctctcgtcaccccatttccctggacaaatcgcttcttatcaaaccttctgggcaa
gccatgggacccccaccgaacaccgagacgagccggaaatcgacaccgcccgatggcgcc
gaaccagcccaaaagaggagaaagaagtcccgcccaggaaaagacgacatggcaatacca
gcaccatcctctcaatctcacaacgtcgacggacacatgattactggagatctggaactc
attggagcagatgtcatgatcagatccagaacctccgcagcccaagctctgggaacagcc
atgggtgcctggcccgaagaatcgcgacttcaggctttcaagtccaggctggtaagccca
ctgtcctcgccaaactccacgactcaattgacggctgccatcattatcgaggagtttgga
aagaacttgaaagccaaggacgcgttggccgagttgttcgtccaacacctgctgcccatg
gtagaaggcgagagacctctagcctatgaggatcttgtgccaaaactccagattgttcgc
acgcaatgttcgtcgttgctccatatcttccaggaagcacacgtacagaacctgccaaac
ctttcaactatcgtccaaggattaccatttacaaacaactatgcctttggagtcgcggat
gccgaaaagctggtcactgtgcaatatgagaagctaaagaaggctatgacaccttcctcg
cgtatgatcgctgcagccaacctagagacgacgcgcaaagaagtagaggccagcattcag
gaagccaagaacatcaaggaagagcgcgatattcgaatcaaggccgctgctgctggcgca
cttgtggcgcttgactcgcctcccaagaaaccatcaccacctatcaaggctatgatggat
agcatcaagaaggaagagaatgtggaattgcaaaaacgttctgcagctgcagttgccggt
tacattgtacacctggtcaatggcaagagatcgggcgtcgtgaacaaggttgtcggcaac
ctggtcaaattctactgtatggagacggcagaaactcccgaattcgctgggcaatcgcac
attgaaaccggtatcctgacgcttaagaaagacgaagacgtacgggaccatccagacgct
gctcgatttgcagaggagtcacgggctgcgagaatcaccaagcgtggtgcacgcgagggc
ctggaacaggttgttgaacgtttcggtgctgaggttttcgaaaaggtgcccattctgaag
gacctgattgagcggccgatcaaggaggcattcaccgaagcgtcgctgcccccgcaaatc
ttcaatgaagacggtgtctttggacaagaagttgtcgatggcctgtcgactttacgcgct
ctggtaggcaaactgcatccaagcgtgagaagttttgtcaaggaactccttccactcatt
gccagggctttacagagcaagctgtacgtattgcggtacgcagctgctaaatgctttgcg
acgatttgcagcgtcatgtctgttgagggtattacaatgcttgtcgagagtgtgctgcca
accattagcgatggtggtaacgtacatgctcgccagggagcaatcgagtgcatataccac
ctcatccacgtcatggacgatgcaatcctgccatatgtcatcttcctcatcactcctgtc
cttggacgaatgagtgattcagacaatgacgtccgattactcgccacaaccagcttcgct
acactggtcaaactcgtaccactcgagtcgggtattcccgatccaccaggtcttccagac
tccctgctcaaaggccgagaccgagagcgcaagtttgttgctcaaatgctagacgccaag
aaggtggagccttttgagattcctgtcggcatcaaggcaacgctccgttcctatcagcaa
gatggtgtcaactggctggcattccttaatcggtataacctccacggaatcctctgtgac
gacatgggtcttggtaagactctacaaactctttgcatggtggctagtgaccatcacatg
cgtgccgacgagtttgccaaatctggagatccaaacttccgtcgcctaccgtctctcatt
gtgtgcccgcccaccctgtctggtcactggcagcaggagattcgccaatatgcgcctttc
cttagctgcgttgcttacgtaggctcgccaccaatccgaagtcagtacaggaacgacctt
gacaaagtagacattgtcatcacttcctacgacatttgccgcaacgacgccgatatcctc
aagcccatcaactggaactactgtgtcctagacgaaggacacttgatcaagaattcaaag
tcaaagacaagccaggctgtcaagcagtttcagtccaaccaccgcctcattctctccggc
acgccaattcagaacaacgtccttgagctgtggtctttgttcgacttcctcatgccaggt
ttccttggtaccgaaaaggtcttccaggagcgttttgccaagcccattgctgcatctcgg
tttgcaaagagctcgtcaaaggagcaagaacggggtgctttggcgattgaagctcttcac
aagcaagtgttgcccttcctccttcgtcgtctcaaggaagaggttctagatgatctacca
cccaagattctacagaactactactgcgatctttccgagctgcagcgcaacctctttgac
gatttcaccaaacgtcaaggtaaagaaatccagtccaaggctggtaatgccgatcgtgag
agcaagcaacacattttccaggctttgcagtacatgaagaaactttgcaactcaccttcg
cttgttgtcaagggccccaccaacaaggcatacgagtcaactcaacagtacctcaaaaag
cacaacactacgattgacgatattgcgcacgcacccaagctcggggctctcaaggatctg
cttgtcgattgtggtatcggagcatcagacgttgtcagcgacaagtcggcgaatgcgaac
ggcgacttacccgaagctgtctcccagcatcgcgctctcgtcttctgtcagatgaaggag
atgctcgacatggtgcagcataatgtgctcgaaaagttgctgccatccgttcagtttatg
cgtctagacggtggtgttgaagccaccaagcgacaagaaattgtcaacaagttcaacaca
gatccgtcttacgacgtcttgcttcttaccactagtgtcggtggtctcggtctcaatttg
actggtgccgacaccgtcatcttcgtcgagcacgactggaacccgcaaaaggatatccaa
gccatggaccgcgcgcatcgtattggtcaaaagaaggtagtcaacgtctaccgcattgtt
acgcgcggcaccctggaggagaagatcctaaatctccaacgattcaaaatcgacgttgcc
tcgacagttgtcaaccaacaaaacgccggtctgcagtcgatgcaaacggatcagatcctt
gatctcttcaacgtatctgctgactcaaacgatccttctgctttgcctgcaccgccttca
aacgccaaggacgacggcactggcatcgacgaaaacgacgctgtcgatgccacgggcgcg
ctgagagaaaaaggcaaaaagggcttcctggatgaactgggcgatctctgggacgagaag
cagtacgacgaagagtttgaccttgatggcttcttgggcaagatgaaagcttag
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integrated database retrieval system