KEGG   Bipolaris zeicola: COCCADRAFT_4058
Entry
COCCADRAFT_4058   CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K12587  exosome complex component MTR3
Organism
bze  Bipolaris zeicola
Pathway
bze03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    COCCADRAFT_4058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bze03019]
    COCCADRAFT_4058
Messenger RNA biogenesis [BR:bze03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     COCCADRAFT_4058
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 19149289
NCBI-ProteinID: XP_007711054
JGI: 4058
UniProt: W6YSY9
LinkDB
Position
Unknown
AA seq 327 aa
MAMNIDRRRNNAPSGGTSAPVFARTIREPQYVEKLRPTRSRGPNELRRIFLQTSIIPSAS
GSAYLEIPSSSVANNSSLIAPTSSLKITASIQGPKPLPRSAPFSPSLLLTTTVKFAPFAT
RHRRGYLRDATERDLGVHLETALRGVIIGERWPKSGVEVVVTILEGDEDGWWGDLASGGN
ATGSGWGLLNVLAGCITVASAAITDAGIDCVDVVCGGVAAIVRNPSSKNEQELLRILDPC
PAEHREVVAACVVGYLASRDEITEMWMKGDVGAEPDALIEGATHAAVGSLAVVKEVLLEA
VQAKFQKQVEGGESGVKRKAQDVDMSG
NT seq 984 nt   +upstreamnt  +downstreamnt
atggctatgaatattgacagacggagaaataatgcgcctagtggtggaacaagtgctccc
gtgtttgcgcgcactatcagggagccgcaatatgtcgaaaagttgagaccgacaagatca
agaggcccaaatgagcttcgcaggatcttcctccaaacgtccattataccctctgcgtcc
ggctccgcgtacctcgagataccgtcgtcttcggttgcgaacaattctagcctcattgcg
ccaacttcctcgcttaagataacggcctcaatacaaggcccaaagcccctcccccgcagc
gcgccctttagtccgtcgcttctcttaacgactactgtgaaatttgcaccgtttgcaaca
cggcataggcggggctatctacgcgacgcaacagaacgcgacctgggcgtgcatctggag
acagcactacgaggcgtcatcattggcgaaagatggcccaagagtggcgtggaagttgtg
gtcacaattcttgagggcgatgaagatggctggtggggtgatttggcaagcgggggaaac
gcgacaggaagtgggtggggtctcttgaatgttttggcaggctgtattacggttgccagt
gctgcaataacagacgcgggcattgactgcgtggatgtagtatgtggaggcgtggccgcc
attgtacgaaatccgtcgtcaaaaaacgagcaagagctgcttaggattctggacccgtgt
cctgcggagcacagggaagtggttgcagcgtgcgtagtgggttacttggcttcaagagac
gagatcacggagatgtggatgaagggagacgttggtgcagagccagatgcgctcattgag
ggagctacacacgcggctgtgggcagtctcgcggtagtcaaggaggtattgctcgaggca
gtccaggccaaattccaaaagcaagtcgagggcggcgagagcggcgtgaagagaaaggcg
caggatgtggacatgagtggatga

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