Bipolaris zeicola: COCCADRAFT_4556
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Entry
COCCADRAFT_4556 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_4556
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_4556
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
COCCADRAFT_4556
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
COCCADRAFT_4556
SLIK complex
COCCADRAFT_4556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
ResIII
DEAD
HDA2-3
Cdh1_DBD_1
AAA_22
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
19149827
NCBI-ProteinID:
XP_007711672
JGI:
4556
UniProt:
W6YET5
LinkDB
All DBs
Position
Unknown
AA seq
1577 aa
AA seq
DB search
MMPSSPGHVASLPYTNGHLSPLAAHVMAADSSSNSSDSDASDAGEHAAAAQASDVDAPGE
EYDEDDEVAAASDSSEDVDAEGEPDGDYDSESPPSEQAESDRARSSSQESTRPTKRKASV
EKEDYIEQNPELYGLRRSGRARPSRRVVDSSDEEEDDDDYDSDQPRKRQRTASRKTSNQP
TPVYRSTGSDSESDGYVGARRNIPTKKQRQRQHAVAAGREPPSQAEVRFSARRTAQVANY
NEEDDEDEFAEEEDEMTSAYWANAVEDSGPVIDKILDHRPKDGLEIDPSFDKHDFEYLIK
WQDKAHYHSTWEEYKTASAYKGIRKLDNYYKGPVQNDMYYHSRKNEDPEEFEQHMVAREA
ERESQLDFHIVERVIDTRDGEDETEYFVKWKGLTYEFCTWEPASLVSRLSQTEIDRYLDR
SANRPTSDLRESNPNTRRKFVKMDTQPDYIKFGQLRSFQLQGVNFLAHNWCRGTNVILAD
EMGLGKTVQTVSFINWLRHDRRQDGPMICVVPLSTMPAWADTFNNWTPDVNYVIYTGREE
ARNIIKEKELLVDNNPKKVKFNVLLTTYEYVLADWQFLQSIKWQFLAVDEAHRLKNRESQ
LYERLTAFNAPCRLLITGTPIQNTLGELAALMDFLMPGKISVDEHVDLSSEDASQKLAEL
SSAIQPYMIRRTKEKVENDLPPKSEKILRVELSDIQLEYYKNILTRNYEALNEGGVGHKQ
SLLNIVMELKKASNHALLFPNAESKLVKNGCSKEETLKALITSSGKMMLLDRLLGKLKAD
GHRVLIFSQMVHMLDILTDYLKLRNYAFQRLDGTVPAAERKIAIDHFNAPGSEDYCFLLS
TRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQQKPVSVYRLVSKDTIEEEIL
ERARNKRMLEFITIQRGVTDRQQKELNDKMSRAAAEPNSADDINNILKRRGQKMFEQSGN
QKKLEELDIDSVLENAEEHKTEQAAGLTSDGGEEFLKNFEYTDVKIDLEWDDIIPKEELE
AVKADIQQRKDEEETQKLLEENAPRKRKAASASAREQRAAKKRALEASQIDVDDDDQSDA
DDNIKRDPKRPLNTKEARNLITAYCRYGSLEERGDEILRAARLVGRDMGVVKATLDEIIE
KSTQLVKEEQTRLKNLEIEAKRALTKKDKKAVLFDYGDVKKVNAETILERPVEMRVLKEA
VEATPDWRNFRVPDAIKPASYSCSWGAREDGMLCIGIQRHGYGAWIPIRDDPELGLTDKF
YLEEHRVDKKEERTKGEDKNAKSPGAVHLVRRANYLLTVLKDKSTSDPNIKRLMENHHRN
NKKHHLGVARRAEKGSSGAASPGPGSAMRRMQSRDSERPSHRAHSSSDIRRPDSRTDGRH
HDRNRDDRPRHSDQYRLSDGHRKEHRNDRGSIDRRQQHADRNGTPENRRKISGDVDRQRP
RLSEDRPRSHSQSQVPDRSVETPKVKEKKPEEFVERRLRPVRDNLSRLKKATPKNYPQKD
AMVKVLKIELIAIGNFIRAETRDNAELEERLWSYTINNHWPRPGVTVPAIKGMYLKMLNS
EKPAASSTATNGQKNGA
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgatgccctcttcgccgggccatgttgcttccctgccatacacaaacggtcatttgtcg
cctcttgccgcccatgtaatggctgccgacagctcctccaactccagtgacagcgatgcg
tccgacgcgggagagcacgccgcagccgcccaggcctccgatgtcgacgcgccgggagag
gaatacgatgaggacgacgaggtagctgctgcttcagactcttccgaggacgtggatgcc
gagggcgagccggatggtgattacgactctgagtcaccgccgtctgagcaggcagagagc
gaccgcgctcggagctcgtcccaagagtcgacaaggccgacgaagcgcaaggcaagcgtt
gaaaaagaagattatattgagcagaacccagagctatatggcctgcgtcgcagcggtcgc
gcccgtcctagtcgtcgcgttgtcgatagtagtgatgaagaagaggatgatgatgattac
gattcagaccagccacgcaagcgacagaggacagcctcgcgcaagacctcaaaccaacca
acaccagtctatcgctctactggctctgattcagagtcagatggctatgttggagcccgt
cgcaatattccgaccaagaagcaacgccaacgtcagcatgctgttgctgcaggtcgtgag
cctccctcgcaagccgaggtccgattttctgcacgtcgcacagcccaggtggcgaattac
aacgaagaggatgatgaggatgaatttgcagaagaggaagacgagatgacctcggcctac
tgggcgaacgctgtggaagacagtggccccgtcatcgacaagatcctcgaccatcggcca
aaagacggattagagattgatccgtcctttgacaagcacgactttgaatacttgatcaaa
tggcaggacaaggcacactaccattcaacatgggaagaatacaagacagcatctgcctac
aaaggcatccgcaaactagacaattactacaagggccccgtccagaacgatatgtattat
cacagccgcaagaacgaagatccagaggagtttgaacagcatatggttgcgcgtgaagct
gagcgtgagagtcagcttgattttcatatagtcgagcgtgtcattgacacgcgggatggc
gaggatgagacggagtactttgtcaagtggaaaggactgacgtatgagttctgcacatgg
gagccggcatcactcgtcagccgtctgtcgcagactgagatcgaccgctatctcgaccgc
tcagcaaatcgacctacctccgatcttcgcgagtcaaatcccaatacccgcaggaagttt
gtcaagatggatacacagcccgactacatcaagtttgggcaactgaggtccttccaactt
cagggtgtcaacttccttgcgcacaactggtgtcgaggcaccaatgtcatcctagccgat
gagatgggtctaggaaaaacagtgcagaccgtctcattcatcaactggctaaggcatgac
cgtagacaggatggaccaatgatctgcgttgtgccactgtctactatgcccgcatgggca
gacactttcaacaactggacccccgacgtcaactatgtcatctacactggcagagaggag
gcccgcaacatcatcaaggagaaggagcttctcgtagacaataacccaaagaaggtcaag
ttcaatgtcctcttgaccacgtacgaatacgtccttgccgactggcagttcttgcagagc
atcaagtggcaattccttgctgttgacgaggctcaccgattgaagaatcgtgagtcacag
ctctatgaacggttaacggcattcaacgcgccctgtcgactgctcatcactggtacccct
atccaaaacacgctaggtgaactagcagcattgatggatttcctgatgccaggaaagatc
tctgtcgacgagcatgttgatctgtcttcggaagacgctagccagaagcttgccgaactc
agctctgccattcaaccttatatgattcgtcgtaccaaggagaaggtagagaatgatttg
cctcccaagtctgagaagattctccgtgttgaactctccgacattcaactcgaatactat
aagaacatccttacccgtaactatgaggctctgaacgagggaggcgttggccacaagcag
tctctgttgaacatcgttatggagctgaagaaggctagcaaccacgctctgcttttccct
aatgctgagagcaagcttgtgaagaacggctgttcaaaggaggaaacgctaaaagcgctc
attacctctagtggtaagatgatgctgctcgatcgactactcggcaagttgaaagccgat
ggtcatcgcgtgcttatcttcagtcagatggtccacatgttggatatcttgaccgactac
ctcaagttgcgcaactacgcgttccagagactggacggaacagtcccagcggcagagcga
aagattgctattgatcatttcaatgctcccggcagcgaggactattgcttcttgttgtct
actagggctggtggtcttggcatcaacttgatgaccgctgacactgtcgtcattttcgat
tccgactggaatcctcaggccgacttgcaagccatggctcgtgctcatcgtatcgggcag
cagaagcctgtgagcgtctatcgtctggtctcaaaggacaccattgaagaggagattttg
gagcgcgctcgaaacaagcgcatgctcgagttcatcacaattcagcgtggtgtgactgat
cgtcagcaaaaggagctgaacgacaagatgagccgtgctgctgccgagccaaactctgcc
gatgacatcaacaacattctcaagcgccgcggacaaaagatgtttgagcagtccggcaac
cagaagaagcttgaagagcttgacattgactctgttttggagaatgccgaagagcacaag
acagagcaggccgctggtctcacatctgacggtggtgaagagttcttgaagaactttgaa
tacacggatgtcaagatcgatctcgagtgggacgacatcattcccaaagaagaactcgaa
gctgtcaaagcagacattcagcagcgtaaagacgaagaagaaacgcaaaagctactcgaa
gagaatgcacctcggaagcgcaaggccgcctcagccagcgcacgagaacaacgagctgcg
aagaaacgcgcgctcgaggcgtctcagatcgacgtcgatgacgacgaccaatccgacgca
gacgacaacatcaagcgtgatccgaagcggccgctcaataccaaagaggcgcgcaatctc
atcacggcgtactgtcgctatggctcgcttgaggagcgtggcgatgagattctgcgcgca
gctagactggttggtcgtgacatgggcgtcgtcaaagccactctggatgagattatcgag
aagagcacacagctcgtcaaggaggagcagactagactcaagaacttagagattgaggct
aagcgtgcccttaccaagaaggataaaaaggccgtactcttcgattatggtgatgtaaag
aaggtcaacgcagagactattcttgagcggcccgtagagatgcgcgttctcaaggaagct
gtcgaagccactccagactggcgcaacttccgtgtcccagacgccatcaagccagcaagc
tattcttgctcttggggtgcgcgtgaggacggtatgctctgtattggtatccaacgccat
ggttacggagcgtggattcccatccgcgatgatccagaactgggactgacggacaagttc
tatctagaggagcaccgtgtggacaagaaggaggagcggaccaagggcgaagacaagaat
gccaagtctcctggagctgtgcacttggtccgtcgtgcgaactacctccttacagttctc
aaagacaagagcacttccgatccaaacatcaagcggttgatggagaaccatcatcgcaac
aacaagaagcatcatcttggcgtggcacgtcgcgcagagaagggatcgagcggtgctgct
agccctggaccaggtagtgcgatgcgtcgcatgcaatcacgtgattcggagcgtccctcg
caccgtgcacacagcagcagcgacatccgacgtcccgatagccgaacagatggacgtcat
cacgataggaaccgtgatgatcgccctaggcatagcgaccagtaccggctgtctgatggc
catcgcaaggagcaccgcaacgaccgaggaagtattgaccgtcggcagcaacatgccgac
cggaacgggacgccagagaaccggcgaaagattagcggcgacgtggatagacagcgtccc
cgtctatccgaggaccgaccacgttcgcacagccagagccaagtacctgaccgcagcgtt
gagacccccaaggtcaaggagaagaagccagaggagttcgttgagcggcgacttcggcct
gtgcgcgacaatctcagccggctcaagaaggcaaccccgaagaactatccacagaaggat
gctatggtcaaggtgctgaagattgagctgattgcgattggcaactttattcgggcagaa
actcgggacaatgccgaactcgaggagcgactatggagttacacaatcaacaaccactgg
cctcggcccggagtgactgttccggcgattaagggcatgtacctcaagatgctgaattcg
gagaagccagcggcaagttcaacggcgaccaacggacaaaagaatggggcttga
DBGET
integrated database retrieval system