Bipolaris zeicola: COCCADRAFT_4820
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Entry
COCCADRAFT_4820 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
bze
Bipolaris zeicola
Pathway
bze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
COCCADRAFT_4820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_4820
Enzymes [BR:
bze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
COCCADRAFT_4820
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
COCCADRAFT_4820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Mpt_N
Motif
Other DBs
NCBI-GeneID:
19149920
NCBI-ProteinID:
XP_007711999
JGI:
4820
UniProt:
W6Y745
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MVGKKEVAPPKPKAAPRGATKAKGAPGAPEVQKVDGGDSMEIDSEGANPQASAGSSAADL
NPGASTSADQTRKRRAPLTHAKDEFAALLEPFYYGKSLTDPINTARDKWNLLPAFLKTKG
LVKQHVDSYNHFVDVDLKKIIKANRFVRSDFDPKFLLEYTDIRVLSPNRQEEDDLEHHRS
TITPNECRLRDMTYAAPIVVDIIYTRGNAKVKRTGIKIGRMPIMLKSNKCVLAGKNDREM
AVMEECPLDPGGYFITRGQEKVILVQEQLNKNRVIVESAKGIMQASVTSSTHERRTKTYV
IQKKGLMYLRHNTLSEEIPIVFVMKALGVHSDKEILLMIAGEDSAYQDNFAINFEACARE
QIHTQERALEYIGHRVRLVKKPLGTSRNRNYHLEAIECLSNVVLPHVPVEGTNYRPKALY
VALMARRVLMAMQDPKLVDDRDYVGNKRLELSGQMLSLLFEDHFKRFNHDFKLSIDKVLK
KQVRAQEFDAFSHFSVHKNHITMGVERAIATGNWSLKRFKMERAGVTHVLSRLSYIAALG
MMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTEDDDDP
VRKIVFMLGAEDICSQTGEEIHAEGVYSVCLNGTPIAVTDTPKRFLNSFRKLRRMGRISE
FTSIHIDHDHCEVHIATDEGRICRPMIIVENQHSKVTSRYLKALRKGTMEFEDFLTRGLV
EYLDTNEENDTNIALKESEINQHTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMG
KQAIGAIAYNQFNRIDTLLYLMVYPQQPMVKTRTIELTKYDKLPAGQNATVAVMSYSGYD
IEDALILNKASCDRGFGRCQVFKKHVTPLKTYANNTSDRINAGALDVANPNHQAIGQDGI
AQVGARLEAGDAFLLKSIPQDTAGPALNLYKDKPERYKLPDCSYIDKACITENESGTTLI
KLLLRQTRRPELGDKFSSRHGQKGTTGLIVQQEDMPFNDQGICPDIIMNPHGFPSRMTVG
KMMELLSGKAGVLNGTLEYGTAFGGSTVEDMSQILVEKGFSYTGKDYLTSGITGEAHQFY
TFFGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYGAS
QLLLERLMISSDAHNVDVCEKCGQMGYSGYCKLCESEKAVRKITMPYAAKLLIQELGSMN
VKVTIGLEDEFPRDA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcaaaaaggaagttgcgccccccaagcccaaagctgccccgcgcggggcgaca
aaggcgaagggtgcgcctggcgcacccgaagtccaaaaggtcgacggcggcgattctatg
gagattgattctgagggcgccaatcctcaagcgagtgctggaagtagcgcggcagatctc
aatcctggggcttctacgtcagcagatcaaacgcgaaagcgacgagcgccactcacccac
gcaaaagacgagtttgccgcccttctcgaacctttctactatggcaagagtctgaccgac
ccgatcaacaccgcgcgcgacaaatggaatctactgccagccttcttgaagactaagggt
ctcgtgaaacagcacgttgactcttacaaccactttgtcgatgtcgacttgaagaagatt
atcaaagccaaccgtttcgtccgtagcgacttcgaccctaaatttctcctcgaatacacg
gacatccgcgtactatcgccgaaccgacaggaagaagatgacctcgagcatcatcgcagt
accattacacccaacgagtgccggttacgtgacatgacatatgctgcgccgatagtagtg
gatatcatatacactaggggaaacgccaaggtcaagcggacgggaatcaagattggtagg
atgcctatcatgctgaagagtaacaaatgtgtacttgctggaaagaacgatcgcgaaatg
gctgtcatggaggagtgtccgctagatccaggaggctattttatcacacgtggacaagag
aaggttatccttgttcaggagcagctgaacaagaatcgagtcattgtcgaaagcgcaaaa
ggaattatgcaagccagcgttacgagttccacccacgagaggcggacgaagacgtatgtt
atccaaaagaaaggactcatgtaccttcgacacaacactctttctgaagagattccaatc
gtgtttgtcatgaaggcactaggagttcattccgataaagaaattctccttatgattgcc
ggagaagatagtgcataccaggacaattttgccatcaatttcgaggcgtgcgcgagggag
cagattcatacacaagaaagagcgctggaatacattggccaccgcgtacgactagtcaag
aagccgcttggtacctcgcgcaacaggaactaccaccttgaggcaattgaatgtctatca
aacgttgtccttccccacgtcccggtcgagggcacgaattaccgacccaaggcactatac
gtagctctcatggctcggagagttctgatggcgatgcaagacccgaagctagtagacgat
cgtgactatgttggcaacaaacgtcttgagctgtctgggcagatgttgtccctcttgttt
gaagatcacttcaagcgctttaaccacgatttcaagctcagcatcgacaaggttctcaag
aagcaagtaagggcgcaggagtttgatgccttttcccacttcagcgttcacaagaaccac
attaccatgggtgtcgagcgcgcaattgctaccggaaattggagtttgaagcgattcaag
atggagcgggccggagtcacgcacgtcttgagcagactcagttacattgcagcactgggt
atgatgacgagaatcagttcgcagtttgagaaaactcgtaaggtctctggtcctcgtgca
cttcagccctcgcaatttggtatgctttgtacttctgatacaccagaaggagaggcttgt
ggtctagtcaagaacctggcactcatgacgcacattacgaccgaagatgatgatgaccca
gttcgcaagattgtgttcatgttgggtgctgaggacatttgttcacaaacaggagaagag
atccatgctgagggtgtttatagtgtctgtctcaatggtacgcccattgctgtcacagac
actccaaagcgattcctcaacagcttccggaaactccgacgaatgggacgtatttccgag
ttcactagcatccatatcgaccatgaccactgcgaagtccacatcgctactgacgaaggg
cgaatttgtaggccaatgattattgttgaaaatcaacactcaaaagttacttcgcggtac
ttgaaagcgcttcgcaagggtaccatggagtttgaggatttcctgacaagaggtctcgtg
gagtatcttgacaccaacgaagagaacgataccaacattgctctcaaggagagtgagatc
aatcaacacacgacacatctggagattgagccgttcacaattttgggcgctgtcgctggt
ctcattccttatcctcatcacaaccagtcgcctcgtaacacctatcaatgtgctatgggt
aagcaagcaattggcgccatagcatacaaccagttcaacaggatagacacactgctatac
ctgatggtctacccgcaacaacccatggtcaagacgcgaaccattgaactcacaaagtac
gacaagcttccggcaggtcagaatgcaaccgtcgccgtcatgtcatactcgggttacgat
atcgaagatgctctcattctcaataaggcgtcatgcgatcgaggatttggtcgttgtcaa
gtatttaagaagcacgtcacgcctcttaaaacgtacgccaacaacacttcagatcgcatc
aacgccggcgcccttgatgtcgcaaatcccaaccaccaggcgattggtcaagatggtatt
gctcaagtcggcgctcgcctcgaggccggcgatgccttcctgttgaaatcgatacctcaa
gataccgcgggtccagcgttgaatttgtacaaagacaagccagaaaggtacaagttgccc
gactgcagctacatcgacaaagcctgcatcacagaaaacgaatcaggtacaacgctgatc
aaactactcctgcgccaaacccgtcgcccagaactcggcgacaaattctcatctcgccac
ggtcaaaaaggtactacgggtctaattgtccagcaagaagacatgcccttcaacgaccaa
ggcatctgccccgacatcatcatgaacccgcacggtttcccctcgcgtatgacagtcggc
aaaatgatggaactcctctccggcaaagctggcgtcctcaacggcaccctcgaatacggc
actgcctttggcggctccaccgtcgaagacatgtcgcagattctcgtggagaagggcttc
tcctacaccggaaaagactaccttacctctggcatcacgggtgaagcccaccaattctac
acctttttcggccccatttactaccagaaactcaagcacatggtccaggataaaatgcac
tcgcgcgcccgtggtccccgtgctatcctcacccgccagccgacggaaggtcgtgcaaga
gacggtggtttgcgtctgggagaaatggaacgtgattgtttgattgcgtatggtgcgtcg
cagctcttgctcgagcgcttgatgattagttctgatgcgcacaatgtggatgtttgtgag
aagtgcggccaaatgggatacagcggatactgcaaactctgcgagagcgaaaaggcggtt
cgtaagattaccatgccgtacgctgccaagcttttgatccaggaactgggcagtatgaat
gtcaaggttacgattgggctggaggatgagtttccaagggatgcgtga
DBGET
integrated database retrieval system