Bipolaris zeicola: COCCADRAFT_5192
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Entry
COCCADRAFT_5192 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K03140
transcription initiation factor TFIID/TFIIF subunit
Organism
bze
Bipolaris zeicola
Pathway
bze03022
Basal transcription factors
bze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCCADRAFT_5192
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCCADRAFT_5192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_5192
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_5192
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCCADRAFT_5192
Coactivators
SWI/SNF complex
COCCADRAFT_5192
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NuA3 complex
COCCADRAFT_5192
Chromatin remodeling factors
INO80 complex (yeast)
COCCADRAFT_5192
SWI/SNF complex
COCCADRAFT_5192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YEATS
pYEATS
BET
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
19150038
NCBI-ProteinID:
XP_007712435
JGI:
5192
UniProt:
W6Y752
LinkDB
All DBs
Position
Unknown
AA seq
225 aa
AA seq
DB search
MPDAKRWVKLITHQKPIDEPSPVEGFPMRTWSIEIWLLDDQGNEVMPNVFEKAVYNLHPS
FEKPKHVLKKPPFRIEEKGWGEFDMTIVLTAVGKGGDHTLEHDLNFQSERYEAKHQVTFR
NPKPELLALLAESGSAEANGMRNKDAAKKKSRKDKNVDMEKLADGLQKLGEDDLLHVVTM
VHDNKTSETYTKNDVENGEFHVDLYTLPDSLVKMLWDFTASKVDL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgccaagcgatgggtcaagctcattactcaccaaaagcccattgacgagcct
tcacctgtcgagggctttcccatgcgaacatggagtatagagatctggctacttgacgat
cagggtaacgaggtcatgcccaacgtctttgagaaggctgtctacaacctccacccatcc
ttcgagaagcccaagcatgtcctcaagaagccccctttccgtatcgaagagaagggctgg
ggtgagttcgacatgaccattgtcctgaccgctgtcggcaaaggcggcgaccacaccctc
gaacatgacctcaacttccagtctgagcgctacgaggccaagcaccaggtgaccttccgg
aatcccaagccggagctcctcgccctcctcgcagaatccggttccgccgaggcaaacggt
atgcgcaacaaggatgctgccaagaagaagagccgaaaggacaaaaacgtcgacatggag
aagctggcagatggcctgcaaaagcttggtgaagacgacctcctgcacgttgtcactatg
gtccacgacaataagacgagcgagacgtacacgaagaatgatgtagagaacggtgagttc
catgtcgacctgtacacgctacccgactccctcgtaaagatgttatgggatttcacggcc
tccaaggtagatctgtaa
DBGET
integrated database retrieval system