Bipolaris zeicola: COCCADRAFT_6126
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Entry
COCCADRAFT_6126 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_6126
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_6126
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
COCCADRAFT_6126
Spliceosome [BR:
bze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
COCCADRAFT_6126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
RRM_PARP14_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
19150315
NCBI-ProteinID:
XP_007713596
JGI:
6126
UniProt:
W6XX79
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MADQQNPGAQLPPPPSASGAPGYDNQPQAQQHMPPPPLAPVIIPQNNNPIPTAISSPMSG
NPMSPTSGQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKT
ASSPSFNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNH
FHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALN
SMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVA
QTSQWQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAIC
QLNGYNVNGRPLKCSWGKDRPPTGQFEGYSPAGGPNSAYPQTPSAYFPQYGGGPQGGPMS
PSGPSPGGAPFAQQQQQAFGNPGMPFQQQMQQPGSAGGYGRGAPQQPQWGQSPQAAFSQN
GFGGYQG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccagcagaaccctggggcacagcttccccctccgccctccgccagcggtgcg
cccggctacgacaaccagcctcaggcccagcagcacatgccgcccccgccgctcgccccc
gtcatcatcccgcagaacaacaaccccattcccacggccattagctcccccatgtcgggc
aaccccatgtccccgaccagcggccagcctggctacgtgccccgtcgcgccgcgcccgag
cccaacaagcgcgccttgtatgtgggaggactcgacccgcgggtcactgaggacgtgctt
cgtcaaatcttcgagaccactggacatgtccagagcgtcaagatcattcctgacaagact
gcaagttctccttctttcaattccaagggtttcaattacggcttcgttgagtacgacgac
cccggtgcggccgagcgtggcatggccaccctcaatggccggcgcattcacaacaatgaa
attcgtgtaaactgggcctaccaatctaacaacacagccaaggaagacacttctaaccac
ttccacatcttcgtcggtgacctttccaacgaggtcaacgacgaggtccttctgcaggcc
ttttccacctttggtcccgtttccgaggctcgcgtcatgtgggacatgaagacgggcagg
tctcgtggctacggattcgtcgctttccgggatcgtgccgatgctgagcgtgccctcaac
tccatggacggcgagtggctcggttctcgagcaattcgctgcaactgggccaatcagaag
ggtcaaccttccatttcccagcagcaggccatggcctcaatgggcatgacaccaaccact
ccgtttggccaccaccatttccccactcacggtgtccagagctacgacatggttgtggct
caaacttcgcagtggcagacgacttgctatgtcggaaatctgactccttacacctcgcag
gctgacctagtgccactcttccagaattttggttatgttaccgagacgcgcttccaatcg
gatcgtggatttgccttcatcaagatggacacgcatgagaacgctgccatggccatctgc
cagctcaacggctacaacgtcaatggccgccccttaaagtgcagctggggcaaagaccgt
cctccgactggccagtttgagggttactcgcctgcgggcggccctaactcagcttacccc
cagacgccgagtgcgtactttccgcagtatggtggtgggccacaaggtgggcccatgtca
ccctcaggacccagccccggcggagcacctttcgcgcagcagcagcaacaagcctttggt
aaccctggcatgccgttccagcagcaaatgcagcagccgggcagcgctggtggctacggc
cgcggcgccccccagcagccacagtggggccagtctccccaagctgcctttagccagaac
ggctttgggggataccagggctaa
DBGET
integrated database retrieval system
