Bipolaris zeicola: COCCADRAFT_7609
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Entry
COCCADRAFT_7609 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_7609
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_7609
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
COCCADRAFT_7609
RSC complex
COCCADRAFT_7609
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
COCCADRAFT_7609
SWI/SNF complex
COCCADRAFT_7609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
QLQ
ResIII
DEAD
HDA2-3
AAA_8
Calmod_bind_C
Motif
Other DBs
NCBI-GeneID:
19150842
NCBI-ProteinID:
XP_007715354
JGI:
7609
UniProt:
W6YGE8
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MASVQTNPEMPGQGQLPANITREQIQHVFQRYTAMKQQGVSESNPEFIKARNLLTMVQKQ
NQYQQQQKMLRQQQMQQRQQGQVDPQAVLQNGAATGMLNGAKPVAPVDGKPAVSTPASTG
PTSTMQIATAGGQAPSVDGQTPTSANNSSMALSKDQLLMLRAQIGAFKHLSKGLPLPSNM
QQQIFGHHQAKKPQNAAEAVAAASQMLDNATRAGSTSSAVGGAVQETRTLPRLPDTFIDP
WSSEVFRDVNYISHTQRKNRPYLATIMPQGVDINAVQQSMEELRKEREILLYNRLTARKA
ELEKMHANIGSWDTSKTDTPEDDGKVKLALVIEQKKLNLLEKQRKLRREIAQQMIHADNL
AMTANRTVYRRLKKQSMREARLTEKLEKQQRDARETKEKKKHHEFIDAIRKHRTELQESG
AAQRMRLQKLGRTMVSTHQNIEKEEQKRIERTAKQRLQALKSNDEETYLKLLGQAKDTRI
SHLLKQTDGFLKQLANSVKAQQRSANNSYEPEEESSSEESDDEDRPGKRKTDYYEIAHRI
KEEVTEQATNLVGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIE
KKRQPGPYLVIVPLSTLTNWTNEFEKWAPSVSKIVYKGPPNARKQYQQQIRWGQFQVLLT
TYEFIIKDRPILSKIKWVHMIVDEGHRMKNAGSKLSMTITQYYSTRYRLILTGTPLQNNL
TELWAMLNFVLPTIFKSATSFDEWFNTPFANTGGQDKMELTEEEQLLVIRRLHKVLRPFL
LRRLKRDVEKDLPDKTERVIKCNFSTLQAKLYKQLVTHNRLMVSDGKGGKTGMRGLSNML
MQLRKLCNHPFVFEEVEDVMNPTKGTNDLLWRSAGKFELLDRILPKFQATGHRVLMFFQM
TQIMNIMEDYLRLRGMQYLRLDGATKADDRSDLLRLFNAPDSPYFCFLLSTRAGGLGLNL
QTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERANYKLDMD
GKVIQAGKFDNKSKDDERDAMLRIMLESAEAAESLEQEEMDDDDLNQIMMRHEDELAIFQ
EMDRKRIAEDPYGPGKPLGRLIGESELPDIYLNEEAPIVDEKDDTPAGRGARERTRVKYD
DGLTEEQWLEAVDNDDDSIEAAIARKEAKMAKRGRNKGGRGDEESPAPSRASSEEPAPKK
RGRKPKAEKRKADEASLDVEPTPRKRGRPAPSKDMLQPDQRASLQKIVNVVYEALNDLEE
ESSDPNIPNRGIIDPFIELPDKWDYPDYYQLIKNPICMKQIEKKINKKEYQSVKQFRQDL
GLLCNNCRTYNEDTSLLFADANLIEQTALDKLKEVTAEYPEWQDYDDGSSVQGGLSTAMT
SAVGTPRAGV
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtccagactaacccagagatgcccggccagggccagctcccggcaaacatc
acccgcgagcagattcagcatgttttccagcgctatactgcgatgaaacaacaaggcgtc
tccgagtccaatcccgagttcatcaaggcgcgcaacctccttacaatggttcagaagcag
aaccagtatcagcagcaacagaagatgctccgacagcagcagatgcaacagcgtcagcaa
ggccaggtggatccacaggctgtgctacaaaacggcgctgccacgggcatgctcaatggt
gcaaagccagttgcgcctgttgacggcaaacctgccgtatctacgccagcctcgaccgga
ccaacgtctacaatgcagattgcaactgctggaggacaggctccttcagtcgatgggcag
acacccacatcggccaacaattcctcaatggcactgtccaaagaccagcttctgatgcta
cgtgctcagattggagccttcaaacacctctccaagggtctccctctgccttcaaatatg
cagcaacaaatctttggccaccaccaggcaaagaaacctcagaatgctgctgaggctgtg
gcagctgcttctcagatgctcgacaacgcgactcgtgccggcagcacctcaagtgccgtg
ggcggcgctgtgcaagagactcgtactctgcctcgtcttccggatactttcatcgacccc
tggagtagtgaagtcttccgagacgtcaactacatctcccacacacagcgcaagaaccga
ccttaccttgcgacaatcatgccacaaggtgtcgacatcaacgctgtacagcagagcatg
gaagaattgcgcaaggagcgtgagatccttctctacaaccgccttacggcgagaaaagca
gaactggagaagatgcatgcaaacatcggctcatgggataccagcaagaccgacactccc
gaagatgacggaaaggtcaagttggctcttgttattgagcagaagaaactgaacctgctc
gagaagcaacgcaaactgcggagagaaatcgcccagcaaatgattcacgcagacaacctt
gccatgactgcgaaccgaaccgtttaccgccgtctcaagaagcaatcgatgcgcgaagcc
cgtctcaccgagaagctcgagaagcagcaacgcgatgcgcgcgagaccaaggaaaagaag
aagcaccacgagttcatcgatgccatccggaagcatcgcaccgagctgcaagaatctggc
gcagctcagcgaatgcgtctgcagaagctcggccgtactatggtttcgacacaccagaac
atcgagaaggaagaacagaagcgtatcgagcgaacggccaagcaacgtctgcaggcactc
aagtccaacgacgaagagacttacctcaagctcttgggccaagccaaggatactcgtatt
tcacaccttctcaagcagaccgatggattcttgaagcagcttgccaactccgtcaaggcg
cagcagcgatctgcaaacaactcatacgagcctgaggaggagagcagcagtgaggaatcc
gatgacgaagaccgaccgggcaagagaaagaccgactactatgagattgctcatcgcatc
aaggaggaggtcactgaacaggccaccaaccttgtcggaggtacactcaaggaataccaa
ctcaagggtctgcagtggatgatatctctgtacaacaataacttgaacggtattcttgca
gacgaaatgggtctcggaaaaactattcagacaatcagtttgatcacatacctgatcgag
aagaagcgacaacctggaccttacctagtcattgtccccttgagtacgcttaccaactgg
accaacgagtttgagaagtgggcgccaagcgttagcaagatcgtgtataagggtcctcca
aacgcgcgaaagcagtaccagcaacagatccgttggggtcagttccaggtcctgctcact
acttacgagtttatcatcaaggacagaccgattcttagcaagatcaagtgggttcacatg
attgtcgacgaaggtcaccgtatgaagaacgctggttccaagctcagcatgaccatcaca
caatactactcaacgcggtatcgactcattctgacaggtacgcccctgcagaacaacctg
acggaactttgggctatgcttaacttcgttctgcctaccattttcaagtcggctacgtcg
ttcgacgagtggttcaacacgccatttgcgaacactggaggtcaagataagatggagctc
actgaagaagagcagttgctcgttattcgtcgtctgcacaaggttcttaggcctttcttg
ctccgacgtctgaagcgcgatgtcgagaaggacctcccggacaagaccgaacgtgtgatc
aagtgcaacttctccactctccaagcgaagctgtacaagcaactcgtcactcacaaccgc
ctcatggtcagcgatggcaaaggtggaaagactggtatgcgtggtttgagcaatatgctc
atgcaactgcgaaagctctgcaaccatcctttcgtctttgaagaggttgaggatgtcatg
aaccccacaaagggtactaatgatctcctgtggcgttcggctggtaaattcgagcttttg
gatcgaatcttgcccaagttccaggctactggtcatcgtgttctcatgttcttccagatg
acgcagatcatgaacatcatggaggattacctacggcttaggggcatgcagtatctgcgg
ttggatggtgcgacaaaagcagacgatcgttcggacttgctgagactgttcaacgcgcct
gattcgccctacttctgtttccttctctccacgcgtgctggtggtctcggtctcaatctc
cagactgctgacaccgtcatcatttacgactcagattggaatcctcaccaggatttgcaa
gcgcaagatcgtgcccatcgtatcggtcagaagaacgaggttcgcattctacgtctgatt
acatccaactcggtagaagagaagattctcgagcgagccaactacaagttggacatggat
ggcaaggtcattcaagctggtaaattcgacaacaagtctaaagatgacgagcgagacgcc
atgttgcgtatcatgttggaatctgctgaagcagccgaaagcctcgaacaagaggaaatg
gacgatgacgacctgaatcagatcatgatgcgacacgaggatgagttggcgatattccag
gaaatggaccgaaagcgtattgccgaggatccttacggtcctggtaagcctctaggtcgt
ttgatcggcgagagcgaactgccggatatctacctgaacgaagaggcacccatcgtcgac
gaaaaggatgacacgcctgctggccgtggtgctcgagagcgtacacgggtcaagtatgac
gacggtctgacggaagagcagtggctggaggctgttgacaacgacgatgattcaatagaa
gcagctattgcccgcaaggaggcgaagatggccaaacggggtaggaacaagggtggacgg
ggcgatgaggagtcgccggcaccatcacgcgccagctccgaggagcctgcacccaagaag
cgaggccgtaagccaaaagccgagaagcgcaaagcagatgaagcctcactcgacgttgaa
cccacaccacggaaacgcggacgaccagcgcctagcaaagacatgttgcagcctgatcag
cgagcatctcttcaaaagattgttaacgtcgtctacgaagcgcttaatgatctcgaagaa
gagtcatcagatcccaacattccaaatcgtggcatcatcgaccccttcattgagctacca
gacaaatgggattatccagactactaccaactgatcaagaatcccatctgcatgaagcag
attgagaagaagatcaacaagaaggagtaccagtctgtcaagcagttccgtcaagatctg
ggcttgctatgcaataactgccggacctacaacgaggacacatcactgctgtttgcggat
gccaatctcattgagcagactgcgctcgacaagctgaaggaggtgacggcagagtatcca
gaatggcaagattatgatgatggaagcagtgttcagggcggccttagcacggcaatgacg
agcgcggttggcacaccgcgggctggagtttga
DBGET
integrated database retrieval system
