Bipolaris zeicola: COCCADRAFT_80364
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Entry
COCCADRAFT_80364 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bze
Bipolaris zeicola
Pathway
bze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCCADRAFT_80364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_80364
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
COCCADRAFT_80364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Roughex
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
19150981
NCBI-ProteinID:
XP_007717550
JGI:
80364
UniProt:
W6YAF8
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MADESDDDLYGDETATQQSKDANKTEDNSSGDEPMDEESGDDDDDEDDSDSDIDIIIEKA
PAPAKPAASQQPQESKAIKIEAPPPSTTPSQQPPPKTGPATGGTIPQISASALSGTAFPA
QRTSTIDVNGNPIYPPQGKEILSVDIDADLAEEHKIWRRPGEDQSDYFNYGFDEFTWELY
RQRQVAMANTIQGQKNDMAQMQAMMGGGPMPGMPGMGGAPQSNGGPGGAPPTGPGGGGGG
GGGAGGGAMGPGG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgagtccgacgatgacctgtatggggacgagactgcgacgcagcagagcaag
gacgcaaacaaaaccgaagacaattcaagcggcgacgagcccatggatgaggagtcgggc
gacgacgacgacgatgaagacgacagcgattccgacatcgacatcatcattgagaaggcg
ccagcaccagccaaacctgctgcctcacaacagccccaagaatccaaagccataaagatt
gaggcgccgccgccttcgactacaccctcacagcaaccccctccaaaaaccgggcctgca
acaggcggcaccatcccccagatatctgcctctgccctctcaggtaccgcctttcctgcc
caacgtacctcgacaatcgacgtcaatgggaatcccatctatccacctcagggaaaagag
attctgtctgttgacattgatgccgaccttgcagaagagcacaagatttggcgccggccg
ggcgaggaccagtccgactacttcaactacggtttcgacgaattcacatgggagctatac
aggcagcgccaggtagccatggcaaataccatacagggccagaagaacgatatggcgcag
atgcaggccatgatgggcggtggtcctatgcctggcatgcctggcatgggaggcgcccca
cagagtaatggaggaccaggcggcgcgcccccgactggccctggtggtggtggaggcggt
ggtggtggtgctggcggcggagctatgggtcctggtggg
DBGET
integrated database retrieval system
