Bipolaris zeicola: COCCADRAFT_81845
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Entry
COCCADRAFT_81845 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
bze
Bipolaris zeicola
Pathway
bze03020
RNA polymerase
bze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
COCCADRAFT_81845
09124 Replication and repair
03420 Nucleotide excision repair
COCCADRAFT_81845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_81845
03400 DNA repair and recombination proteins [BR:
bze03400
]
COCCADRAFT_81845
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
COCCADRAFT_81845
DNA repair and recombination proteins [BR:
bze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
COCCADRAFT_81845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
19151251
NCBI-ProteinID:
XP_007706772
JGI:
81845
UniProt:
W6YN72
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MDYDPDGGQINVRFLQADNQRAHFIVQNFNLETANALRRVMLAEIPTLAIDVVEVFDNTS
VLADEFVCHRLGLIPLSSKGVDDLLYSRDCDCEGYCDNCSVVLTLNAKCTGSEVMKVYAR
DLVIESRPPNDELGRPVITDSEGTGSCIVKLRRGQAINMKCIAKKGIAKEHAKWAPSAAI
GFEYDPANKLHHLDYWHEEDAEKEWPKDEARVNLDGGPPNPDEPFNYNAVPTRFFYDVET
VGGIEPDQIVAKGIQRLQIKLAEVLKELSGGIGDHEDFGGAQSPMLNGGGYGDAGGYTPV
GGPGGYGGASSWGGAAQGGTTPYGATPYGQGW
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggactacgatccagatggcggccaaatcaacgtccgcttccttcaggccgacaaccag
cgcgcccacttcattgtccaaaacttcaatctcgagaccgcaaatgcacttcgccgtgta
atgctcgccgagatcccgacgctcgccatcgatgtcgtcgaagtgtttgacaacacatcg
gtccttgccgatgagtttgtctgccaccgcctcggtctcattcccttgtcgtccaagggc
gtagatgacctgttgtattcgcgcgactgtgactgcgaaggctactgcgacaactgtagt
gtcgttcttactctcaatgccaaatgcacaggcagtgaggtcatgaaggtgtatgcgcgc
gatctggtcatcgagtcgaggccgccgaatgatgagctaggacgaccagtgattacggat
tcagaggggacgggcagttgtatcgtgaagctgcgcagaggtcaggccatcaacatgaag
tgcattgcaaagaagggcattgcaaaggaacacgcaaagtgggcacccagtgcagcgatt
ggattcgaatacgatcccgcaaacaagctgcaccacctggactactggcacgaggaagac
gcagagaaggagtggcccaaagacgaagcccgtgtcaatctcgacggcggtccacccaac
cccgacgaacctttcaactacaatgccgtgcccacgcgcttcttctacgacgtcgaaaca
gtcggcggcatcgagcccgatcagattgtcgcaaagggaattcaacggttacaaatcaaa
ctcgccgaagtcctcaaagaactatctggtggcattggagaccacgaggatttcggtggt
gcccagagccccatgttgaatggaggaggctacggcgacgcaggtggttacacgccggtc
ggaggccccggaggctatggcggtgccagttcctggggtggcgcggcccaaggaggcact
acaccatatggtgctacgccttacggccagggctggtag
DBGET
integrated database retrieval system