KEGG   Bipolaris zeicola: COCCADRAFT_81845
Entry
COCCADRAFT_81845  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
bze  Bipolaris zeicola
Pathway
bze03020  RNA polymerase
bze03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    COCCADRAFT_81845
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCCADRAFT_81845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bze03021]
    COCCADRAFT_81845
   03400 DNA repair and recombination proteins [BR:bze03400]
    COCCADRAFT_81845
Transcription machinery [BR:bze03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     COCCADRAFT_81845
DNA repair and recombination proteins [BR:bze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      COCCADRAFT_81845
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 19151251
NCBI-ProteinID: XP_007706772
JGI: 81845
UniProt: W6YN72
LinkDB
Position
Unknown
AA seq 332 aa
MDYDPDGGQINVRFLQADNQRAHFIVQNFNLETANALRRVMLAEIPTLAIDVVEVFDNTS
VLADEFVCHRLGLIPLSSKGVDDLLYSRDCDCEGYCDNCSVVLTLNAKCTGSEVMKVYAR
DLVIESRPPNDELGRPVITDSEGTGSCIVKLRRGQAINMKCIAKKGIAKEHAKWAPSAAI
GFEYDPANKLHHLDYWHEEDAEKEWPKDEARVNLDGGPPNPDEPFNYNAVPTRFFYDVET
VGGIEPDQIVAKGIQRLQIKLAEVLKELSGGIGDHEDFGGAQSPMLNGGGYGDAGGYTPV
GGPGGYGGASSWGGAAQGGTTPYGATPYGQGW
NT seq 999 nt   +upstreamnt  +downstreamnt
atggactacgatccagatggcggccaaatcaacgtccgcttccttcaggccgacaaccag
cgcgcccacttcattgtccaaaacttcaatctcgagaccgcaaatgcacttcgccgtgta
atgctcgccgagatcccgacgctcgccatcgatgtcgtcgaagtgtttgacaacacatcg
gtccttgccgatgagtttgtctgccaccgcctcggtctcattcccttgtcgtccaagggc
gtagatgacctgttgtattcgcgcgactgtgactgcgaaggctactgcgacaactgtagt
gtcgttcttactctcaatgccaaatgcacaggcagtgaggtcatgaaggtgtatgcgcgc
gatctggtcatcgagtcgaggccgccgaatgatgagctaggacgaccagtgattacggat
tcagaggggacgggcagttgtatcgtgaagctgcgcagaggtcaggccatcaacatgaag
tgcattgcaaagaagggcattgcaaaggaacacgcaaagtgggcacccagtgcagcgatt
ggattcgaatacgatcccgcaaacaagctgcaccacctggactactggcacgaggaagac
gcagagaaggagtggcccaaagacgaagcccgtgtcaatctcgacggcggtccacccaac
cccgacgaacctttcaactacaatgccgtgcccacgcgcttcttctacgacgtcgaaaca
gtcggcggcatcgagcccgatcagattgtcgcaaagggaattcaacggttacaaatcaaa
ctcgccgaagtcctcaaagaactatctggtggcattggagaccacgaggatttcggtggt
gcccagagccccatgttgaatggaggaggctacggcgacgcaggtggttacacgccggtc
ggaggccccggaggctatggcggtgccagttcctggggtggcgcggcccaaggaggcact
acaccatatggtgctacgccttacggccagggctggtag

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