Bipolaris zeicola: COCCADRAFT_8208
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Entry
COCCADRAFT_8208 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bze03009
]
COCCADRAFT_8208
Ribosome biogenesis [BR:
bze03009
]
Eukaryotic type
90S particles
Other 90S particles
COCCADRAFT_8208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
Spt6_S1
HAT_PRP39_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RNase_II_C_S1
TPR_19
PPR
TPR_CcmH_CycH
Mad3_BUB1_I
PPR_2
Motif
Other DBs
NCBI-GeneID:
19151301
NCBI-ProteinID:
XP_007716094
JGI:
8208
UniProt:
W6XQA8
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MGAVKRKAEQGATLSKKPKGASGDRSAKRRKSDVDQQSPAKAKLENPAPPTSIFKDEEKK
SFPRGGASVLTPLEHKQIQIKANQDVLFEQTGQKRPGGDDGEGYSDMGSEDDEKKSAPKS
KKKMTKKSKKTHESGDKEDVVKVETLSYKKLSPGTIVLGQITDISHQDLVLALPNNLVGY
VPLTAVSDKLNERLEKLLKEDESDKEDGSDKDDFEDVDLRELFSVGQYLRACITATSSEG
AKARKRLELSIEPKLVNTGLTKRKIPVNGMIQASVVSNEDHGLVMDLGLNDATLKGFLPK
GELGPNLQHSKVQEGAVFMCLVTGLNSDGRIVKLSADHTKAGNLTKGNTLTEAPTIDVFL
PGTAVDLLVTENTPNTITGKILGLIDATADAYHSGATEKATDVSQKHKIGSKVKARVLFT
CPGSDPRKVGVSLLDHVLSLSTRMSGKPKERKPPIDLLPISTIVESAKVVKVAPSQGAFF
DLGIKDVVGFAHISRLSDDKVDILSEEAGAFKLDSNHKARIVGYNALDGIFQLSLEKKVI
DQPFLRIEDIKAGEVVKGKVHKLFADKSGATAVLVHLADGITGLVQEMHLADVRLQHPER
KFREGLPVTARVLYTEPARHQIHLTLKKSLVNSEVKPWTNYDMISEGATGPGILVSVRRN
GATVQFYNRVKAWLPVAEMSEAFIHDATRHFHAGQVVNVRVLSVDTKERQLLVSCKDPAA
VDINKEAAFNALNPGGIVKGTVIEKSDESATLDIGNGVKGILRLGHLTDGSEKKDISTMK
KIRVGGTLEDLVVLTKHGKSKTATVSNKPSLRKDAQASKLAISIEDLQAGETVHGFVRGI
LSDKVFVELGNGISGALFRSQLPEDMAAAPDFGLRKDQSITARVTHVDAGKGLFWLSMRS
EAEAASAKAAAAPPVKVAEPLVDPVDPKMTSTDDIKFGTLMTVRVRSVKDTQLNVELAAN
VPGRISVSELFENWDSIPDKKRPTAHFKMNDTIQARVLGRHDPRNFRFLPITSRSSNKTT
TYEMTARTKEIKSEADVLSLDKVTVGSSHIAFINNIADRHVWVNISANIRGRIDFFDLTD
DLEKLSDVEKNFPVGSSLKVRVKAVDAANGKLDLTAASTVTGKSLSLQDLKVGHVLPARV
TKLHDASIVVQINESIAAPIFMEQLADDYDKAQPKNFVVGDVLRVCVIDIDIPNKKLGLS
ARPSRVLSSSLPVKDPEITDRTQLKVNQVVRGFVKHIANNGVYVRLGPHVEAYVRVSHLS
DEYIKDWKSAFHVDQLVTGKVISNKEDQRNPQLSLKTSVIKTDYVEPLEFATLKIGQIVT
AKVRHVEDYGVFLIVDNSNNVSGLCHISQIADAVVDKEKLKEMYKKDDVVKAKVIKFDPK
SRKVSFTLKYSQVKGEGEGEDEEMEDASDVEQSEDDDSEGGVELDDDVDMRSVKSAESDD
DIELADADSSEDESDNDESKATAKGLSTSGFDWTGATLDFDQQKGAAESESEDDAPKKKK
KSKKATIKEDRTGDLDAYGPQSVADYERLLLGQPNSAELWVRYMVFQRELNEIEKARQIA
RRALATINPREEKEKLDVWTALLHLENDFSSDDAINAVFKEACQNNDDREIHERMIKIYI
SSGKIDKADELYQSMMKNKSFTADPKFWLSYAAFLMDVIQPPSPGRARALLQRATQSVAA
PQHRYLTQKFAALEFKSPNGDTERGRTIFEGLVDTFAKKGDVWDMYLMLEQSHGEADKVR
DLFERMTKVGKSSRIRGVFKKWAEWENSVGNKKGVEKVKKLEEAWREKKAEKDDE
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggtcaagcggaaagcagagcagggcgccaccctgtccaaaaagcccaagggc
gcatccggcgaccgatcagcgaagcggcgcaagtccgatgtcgaccagcaatcgcctgca
aaggcgaagcttgagaaccctgcaccaccaaccagcattttcaaggatgaagagaagaag
tcgtttcccagaggaggcgccagtgtcttgactccactcgaacacaagcaaattcagata
aaggcgaaccaggatgttcttttcgagcaaaccggccagaagcgtcccggcggcgatgat
ggcgaaggatacagcgacatgggttccgaggacgatgagaaaaagtctgcgcccaagtca
aagaagaagatgactaagaagagcaaaaagacacacgagagcggcgacaaggaggatgtg
gtaaaggtcgagactctcagctacaagaaactgtcgcctggaactattgtacttggtcag
atcaccgacatttcccaccaagaccttgtgcttgccctccctaacaatctagtcggctac
gttcccctcactgccgtgtccgacaaactcaacgagagactagagaagctcctcaaagaa
gatgagagtgacaaggaagatggaagtgacaaggatgactttgaggatgtcgatctcagg
gagctcttctccgttggccagtaccttcgtgcatgcatcaccgcaaccagcagcgaaggc
gcaaaggcaaggaagcgactcgaactgtcaattgagcccaagctggtcaacacgggcctt
acaaagcgcaaaatacctgtcaatggcatgatacaagcgtctgtcgtgagcaatgaggac
cacggtctggtcatggatctgggtttgaacgatgccacattaaagggctttttaccaaag
ggcgagcttggtccaaacctacagcattcaaaagtccaagagggtgccgtcttcatgtgc
ctggttaccgggctcaactctgacgggcgcatcgtcaagctctctgccgaccacaccaaa
gcgggaaacctgaccaagggcaataccttgacagaagcacctaccattgacgtattcctc
ccgggaactgcggtcgaccttctcgttacagaaaacacgccaaacacaatcacgggcaag
attctgggcttgatagatgcgacggctgacgcataccactccggcgcgactgagaaggcc
accgatgtgtctcaaaagcacaaaatcggatccaaagtaaaggcccgtgttttattcaca
tgtcctggctcagaccccaggaaggtcggcgtgtctttactagaccatgtgctttcgttg
tctacgcgcatgtctggaaaacccaaggagcgcaagcctccgatcgacctgctcccaatt
tccaccattgttgaaagcgccaaggtcgttaaggtggcaccaagccaaggtgcattcttc
gaccttggaatcaaagatgttgtcggcttcgcccacatctcgcgactctcagacgacaaa
gtcgatattctctcagaggaggctggtgcattcaaacttgactcgaaccacaaggcaaga
attgttggctacaacgctcttgacggaattttccagctgtcccttgagaagaaggtcatt
gaccaaccctttctccgcattgaggacatcaaagctggtgaagttgtcaagggcaaggtg
cacaagcttttcgcagacaagtctggagcaaccgctgttcttgtccatctggctgatggc
atcactggcctggttcaagagatgcacctcgctgatgtccgattgcaacatccagaacgc
aagtttagggaaggactaccggtcacggctcgagtgctctacaccgaacccgcgagacac
caaatacaccttaccctcaagaagtcattggtcaactccgaggtaaagccttggacaaac
tacgatatgatttcagaaggtgccactggccctggaattttggtcagtgtccgccgtaat
ggtgccaccgtgcagttttacaaccgtgtaaaggcatggcttccagtcgcggagatgagc
gaggcattcattcatgacgcaacacgacactttcatgctgggcaggttgtcaacgtgcgt
gtcctctctgttgacacaaaagaacgtcagctcttggtgtcctgcaaggatcctgctgct
gttgatatcaacaaggaagccgcctttaatgctctcaaccccggtggaatcgtcaaagga
acggtcattgaaaagtctgacgaatcggccactctggacattggcaatggtgtcaagggc
attcttcgccttggtcatctgactgacggatcagagaagaaggacatctcgaccatgaag
aagattcgcgttggtggaactttggaagatctcgtggttctcaccaagcatggcaaatcc
aaaacggcgaccgtatccaacaaacctagtcttcgaaaagacgcacaggcctcaaaactt
gccatcagtattgaggatctgcaagcgggtgagactgtgcatggattcgtgcgcggtatc
ctctcagacaaggtctttgttgagcttggcaatggcatcagcggtgcactgttcagatcg
cagttaccagaagacatggccgcggcgcccgactttggcctccgcaaggaccaatccatc
actgcccgagttacgcatgtagatgccggaaagggactcttttggttgtcgatgaggtct
gaagctgaagctgcttcagcaaaggctgctgctgcccctccagtaaaggtagcagagcct
ctggttgaccctgtggaccctaaaatgacatctaccgacgacatcaagtttggtactctg
atgaccgtccgtgtccggtcagtcaaggacacacaactcaacgttgagcttgccgcaaat
gttcctggtcgcatttctgtatcggaactgttcgaaaactgggatagcattcctgacaag
aagcgaccaactgcacacttcaagatgaatgataccatccaggctcgggttttgggaagg
catgatcctcgcaatttccgtttcctcccaatcacatctcggtcaagtaacaagacgaca
acatacgaaatgaccgcgaggacgaaggagatcaagtcagaagcggatgtgttgagcctc
gacaaagttacggtcggctcatctcacattgctttcattaacaacattgccgaccgccat
gtctgggtgaacatctcagccaacatccgcgggcgcatcgacttcttcgacctaactgac
gatcttgagaagctatctgatgttgagaagaactttcccgtgggttcttctctcaaagtc
cgtgtaaaggcagtggatgctgcgaatggaaagctagacttgacagctgcatctacagtg
accggaaaatcactgtctctccaagacctgaaagtcggtcacgtcctacccgcacgtgtg
accaagctgcacgatgcatcaattgttgttcaaatcaatgaaagcatcgctgcacccatc
ttcatggagcagttggcagatgactacgacaaagctcagccgaagaattttgtggttggc
gatgtcttgcgagtgtgcgttattgacattgacattccaaacaagaagctaggattgtcg
gccaggccttccagggtcctgagctcttcattgccagtcaaggatcctgaaatcaccgat
cgtacacagctcaaggtgaaccaagtcgtccgtggcttcgtcaagcacattgcaaacaac
ggtgtctacgtccgtctaggtccacatgttgaagcctatgtccgcgtcagtcacctttca
gacgagtacattaaagattggaagagtgcattccatgtggatcagctcgtgaccggcaag
gtcatctcgaacaaggaagatcaacgcaacccacagctgagtctgaagacttcagtcatc
aagacagactacgtcgagcccttggaatttgctaccctaaagattggccaaatcgtcact
gccaaggtcaggcatgtagaggactatggcgtcttcctcattgtcgacaactcgaacaat
gtcagcggtctttgccacatctctcaaatagcagatgctgttgttgataaggagaagctc
aaggaaatgtacaagaaggatgatgttgtcaaggctaaagtcatcaagtttgaccccaag
tcgaggaaggtcagctttacgttgaagtattcacaggtgaagggcgaaggcgaaggcgaa
gatgaggagatggaggacgcctcggatgttgagcaatcggaggacgacgattcggaggga
ggagttgagctcgacgatgatgttgatatgaggagcgtcaagagcgcagaaagcgatgat
gatattgagcttgccgacgcagatagctctgaagacgagtctgacaacgacgagtcaaaa
gcaactgcaaagggcctcagcacttctggcttcgactggacgggtgccaccctcgacttt
gatcagcaaaagggtgcggctgaatccgagtccgaggatgatgctccaaagaagaaaaag
aagagcaagaaggccaccatcaaggaagatcgcactggtgaccttgatgcctatggccct
cagtctgtcgcagattacgagcgcttactcctcggacagcctaacagcgccgagctgtgg
gtacgctatatggtattccagcgcgagctcaacgagattgagaaggcgcgccagattgcc
cgtcgtgcgctggccaccatcaacccacgagaggagaaggagaagcttgatgtctggacg
gccttgctgcacttggaaaacgacttctccagtgacgatgcaatcaacgcggtcttcaag
gaagcatgtcaaaacaacgatgaccgcgaaattcacgagcgcatgatcaagatttacatt
tcatcgggcaagattgacaaagcagatgagctttatcaatccatgatgaagaacaagtcg
ttcacagccgacccgaaattctggctttcctacgccgcatttctcatggacgttatccag
ccaccatctccaggtcgggcccgcgcccttcttcaacgcgccacacaatctgttgcagcc
cctcaacaccggtatcttactcaaaagtttgccgcgctggaattcaagtcgcccaatggt
gataccgagcgcggccgcaccattttcgagggactcgtcgacacctttgccaagaaggga
gatgtatgggacatgtatctgatgcttgagcagagccacggtgaggctgacaaggtccga
gatttgttcgagaggatgaccaaggtgggcaagtcgtcgaggattaggggtgtgttcaag
aagtgggcagagtgggaaaacagcgtggggaacaagaagggtgttgagaaggtgaagaag
ctggaggaggcatggagggagaagaaggcggaaaaggatgacgagtaa
DBGET
integrated database retrieval system