Bipolaris zeicola: COCCADRAFT_82975
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Entry
COCCADRAFT_82975 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
bze
Bipolaris zeicola
Pathway
bze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCCADRAFT_82975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_82975
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCCADRAFT_82975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Nup54_57_C
Adhesin_P1_N
Motif
Other DBs
NCBI-GeneID:
19151468
NCBI-ProteinID:
XP_007707250
JGI:
82975
UniProt:
W6YG89
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MSFSFGNIGGGEKKTGTLFGSTTAPAGGLFGQSQQQQQQPQQSSNTGGGLFGSAAPAQNN
TTSLFGSTQPQQQQTTGSSLFGQPQQQQNASASLFSQPQQQAQQQQPNMSNSLFGASLQP
APILTSVQAQSIQQQREGLPQLRQSSAQPFAGSTMSGHREKSVVEQIRILNNKWDPENPE
CVFQFYFYNSVKPEEAPFYGPSQGEDERKWEEALSKKPSPGAIPVLARGFEQVGERIRQQ
AAAVTALRTRLHEINNSLSLLKDAHELTVASRITEAKRKHIVFTQRTLALATKVQILRNR
GYVMDPQEEDLKKKLIELEKQTFDPVLGGRQEEIWARMSSVRERARILQEETEKLGRTMD
KQQNGELLSEEDQKALEKLLKDYDRQLEHLKKWVDDTKEEYDEWEAAKQARPAKR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttagctttggaaatattggcggtggagaaaagaagacgggcacattgtttgga
agcactacagcaccagctggtggtctctttggccaatcgcagcaacagcaacagcaacct
cagcagtcgagcaacacgggcggtggtctttttggttctgcggcaccggcccagaacaac
accacgagcttgtttggctcgacacaaccacagcaacagcagaccacgggctctagtctg
tttggccaaccacagcaacaacaaaatgccagtgcgagcttgttcagtcagccccagcag
caggcgcaacaacagcagcccaacatgagcaacagtctatttggcgcctcgctccagcct
gcccctatcctaaccagcgtgcaggcgcaaagcatccagcagcagcgcgaagggcttccc
cagctgcgccagtcttcagcacagcctttcgccggctctaccatgagcggtcacagagaa
aagtcggtcgtcgagcagatacgaatcctcaacaacaagtgggatccagagaacccggaa
tgcgtattccagttttacttctacaactctgtcaagccagaagaagcgcctttctacggg
ccctcgcaaggcgaagatgagcgaaaatgggaggaagccctctcaaagaagccgagccca
ggcgccatccccgtactggcgcgtggtttcgagcaagttggagagcgcatacggcagcaa
gctgcggccgtcaccgcgctgcgcacacgtcttcacgagatcaacaacagtctctcgtta
ctcaaggatgcacatgagctgacggtagcgtcgcgcatcaccgaagccaagcggaagcac
attgtttttacccagcgaacacttgccctcgcgaccaaagtacaaatcttgcgaaaccga
ggatacgtcatggacccacaggaagaggacttgaagaagaagttgattgagctggagaaa
cagacttttgaccccgtactcggaggtcggcaagaggagatttgggcgcgcatgtccagc
gtgcgcgagcgtgcgcggatactacaagaggaaacagagaagctgggcaggaccatggac
aagcaacagaacggcgagcttctttcagaagaagatcagaaggcactggagaagctgctg
aaagattacgaccgtcaactcgagcaccttaaaaaatgggttgatgatactaaggaagag
tatgacgagtgggaagcagcaaagcaagcaaggccagcgaagcgataa
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