Bipolaris zeicola: COCCADRAFT_83306
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Entry
COCCADRAFT_83306 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
bze
Bipolaris zeicola
Pathway
bze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCCADRAFT_83306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bze03400
]
COCCADRAFT_83306
DNA repair and recombination proteins [BR:
bze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
COCCADRAFT_83306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
IFN-gamma
Motif
Other DBs
NCBI-GeneID:
19151547
NCBI-ProteinID:
XP_007707394
JGI:
83306
UniProt:
W6YFW4
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MASRPEIKEEDESGFCKFFRNLEEKDNETVRIFDRGDYYSAHGEDAKFIANTVYKTTAVI
RKLGREPGLESVTMTVTVFRNFLRDALFRLSKRIEIWQSTAKRMDWKVVKQASPGNLQDL
EDELGGQIESAPIILAVKVSAKASEARRVGVCFADASVRELGVSEFLDNDLYSNFESLLI
QLGVKECLVQLDSTKKDVELSKLRTIADNCGCAVAERAAADFGTKDIEQDLPRLLKDDRA
AGSLPLTDQKLAMGSAACLIRYLGVMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNLMP
GPRDGAKNMSLYGLLNHCKTPTGSRLLAQWLKQPLMNISEIERRQQLVEAFANDTELRQT
MQEEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVVIRLPGFLSSLEAVIDEQYKEPLDT
EYTEKLRQYTTAFAGLQDMVETTVDLEALDNHEFIIKPEFDESLRTIRKRLDKLKRDMES
EHMRVGDDLNQDTEKKLFLENHKVNGWCFRLTRNEAGCIRQKKQYQEISTQKNGVYFTTN
TLQEKRREFDQLSENYNRTQAGLVNEVVSVASSYVPVIEKLAAVLAHLDVIVAFAHVSVH
APTSYTRPKMHPRGTGDTILKEARHPCMEMQDDISFITNDVSLVRDKSEFLIITGPNMGG
KSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQIKGVSTFMAEMLETAN
ILKSATKESLIIIDELGRGTSTYDGFGLAWAISEYIIKEIGAFALFATHFHELTALTDTY
PQVQNLHVVAHISEGSSTADDDGDVDMENAAAQKKREVTLLYKVEPGFSDQSFGIHVAEL
VRFPQKVINMAKRKADELEDFSGKHEEGFVQASKEEVEDGSRLLKEVLVEWKKEVESKGL
TKKQQVERMRELVKGNEKLMANGFFKSIQAL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagaccagagattaaggaggaggatgaatccggtttctgcaagttctttcgc
aatctagaagaaaaggacaatgagacggtgcgcatattcgaccgtggcgactactacagc
gcccacggcgaggatgccaagttcattgcgaatactgtctacaaaaccacagccgtaatc
cgcaagctgggacgagaaccaggactcgagtccgtcacaatgaccgtcaccgttttccgc
aacttcctccgagacgctctatttcgactcagcaaacgcattgagatttggcagtcaaca
gccaagcgcatggactggaaagtcgtcaaacaggcatcgcccggcaacctacaagatctg
gaggatgagctgggcggtcagattgagagtgctccgataatattggcggtcaaggtttcg
gccaaggcatcggaggcacgaagggtgggtgtatgctttgccgatgcaagtgtacgggag
ttgggcgtttcagagtttcttgacaatgatctctattccaacttcgagtcactactcatt
caactgggtgtgaaggagtgcctggtacaactggactcaacaaagaaggatgtcgagctc
agcaagctccggactatcgccgacaactgcggatgtgcagtggcagagcgagcagcggcc
gattttggcacaaaagacatcgagcaagacttgcctcggttgctcaaggacgatcgtgct
gctggttcgctgcctttgacagaccagaagttggccatgggctcagctgcgtgtctgatc
cggtacctgggtgttatgtctgattcatcaaactttggacaatatcagctctaccaacac
gacctgtcacaatacatgaagctcgatgcggccgcgctgaaagcactgaacctcatgcct
ggaccacgagatggtgctaagaacatgagtttgtatggtctgctcaatcactgcaaaaca
ccaaccggcagtcggttactggcacaatggctcaagcagccattgatgaatatcagcgag
attgaacgacggcagcagctggttgaagcgttcgccaatgatacagagctgagacaaacc
atgcaagaagagcacttacgctcaatacctgacttataccggttagcaaagaagttccaa
cgcaaggcagcaaatttggaagacgttgtgcgggcataccaggttgtcattcggttacca
ggtttcctcagctctctcgaggcagtcattgatgagcaatacaaagagccgctcgataca
gagtacacggagaaactccgccaatataccacagcatttgccggtctgcaagatatggtg
gagacgacggttgacttggaggctctcgacaatcatgaattcatcatcaagcccgagttt
gatgaatcactaaggactattcgaaagcgcttggataagctcaagcgcgacatggaatct
gagcatatgcgtgtgggcgacgaccttaatcaagatacagagaagaagcttttccttgaa
aatcacaaagtcaatggctggtgcttccgtctgacgcgcaatgaagcaggttgcattcga
caaaagaagcagtaccaggaaatctcgacacagaagaacggtgtctacttcacaacaaat
actctacaagaaaagcgcagggagtttgaccagttgtctgaaaactacaaccgcacacaa
gcaggtctagtcaacgaagtcgtctcggtagcttcatcctacgtccctgtcatcgagaag
ctcgccgcagtgcttgcacacctcgatgtcattgtagcctttgcacatgtctccgttcat
gcgccaacctcgtacacaaggcccaagatgcacccacgaggtaccggcgataccattctc
aaagaagcgcgacacccatgtatggaaatgcaagacgacatttccttcataacaaacgac
gtttccctagtccgtgacaagagcgaattcctcatcatcacaggacccaacatgggcggt
aaatcgacctacatccgccaaatcggcgtcatcgctctcatggcccaaatcggatgcttc
gtcccctgttcagaagccgaactcaccatcttcgactgcatactcgcacgtgtgggcgcc
agcgacagccaaatcaaaggcgtatctaccttcatggccgaaatgctcgaaacagcaaac
atcctcaaatccgccaccaaggaatccctcatcatcatcgacgagctgggccgcggaaca
agtacgtacgatggattcggactggcgtgggccatctccgagtacatcatcaaggagatt
ggggcatttgccttgtttgccacacatttccacgaactgaccgcactcacggatacgtat
ccgcaggtccagaatctgcacgtcgtagcgcatatttccgagggcagcagcaccgccgac
gacgatggcgatgtagacatggagaatgcggctgcgcagaagaaacgcgaagtcacgctt
ctctacaaggtagaaccgggtttctctgaccagtcttttggtattcacgtcgcggaactg
gtgcgcttcccgcaaaaagtcatcaatatggcgaagcgcaaggcggatgagcttgaagac
ttttctggaaagcatgaagaggggtttgtgcaggcgagtaaggaggaggtcgaggatggg
agtcgcttgctgaaagaggtgctggtggagtggaaaaaggaggtggagagtaaggggttg
acgaagaagcagcaggtggagcggatgagggagttggtcaagggaaatgagaagttgatg
gcgaatgggtttttcaagagcattcaggcgctgtga
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