Bipolaris zeicola: COCCADRAFT_83548
Help
Entry
COCCADRAFT_83548 CDS
T03110
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COCCADRAFT_83548
Enzymes [BR:
bze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
COCCADRAFT_83548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
19151598
NCBI-ProteinID:
XP_007707509
JGI:
83548
UniProt:
W6YKH8
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MRCLAALTTLLLAPTAVFAAWGWTDDGKNYVIDTNANLVVKVSKSNADMTSIKYRGVEYN
GQNGKNSHVESGLAPGTVTIKQYTSPANIIRVTMKVGTLTHTLVFRYGNPNVYIFMNKRD
TSITVSRYIVRIPANIFTNNVNEDTDWIPNGAPAIESGDINGVNGQTWSKHYSGKKYGRT
IDYDYVGYTNNNVGMYLIRSNHEKASGGPFFRSLIRRGGDGGPDLYDIYQYNMGHTDPMR
LGLQGPSVLHFTDNGAAPNHNLFARNANWDWFDSLEIEDWVPASRRGAVAGVGLANMKSG
FQYVVGLKNDQAQYWTIATGAWRISNALPGTYTLTVYKGELEVHTSTVTISPGSTATRNT
ITLVDPNDTPTIWRIGDWDGTPRGLLNFQDTPMKPTYMHPSDSRLAKWDAGNFIVGTTPI
SGFPAYIWKDINNDHLVYFRLTDAQLARGAKIRIGVTQGQAGGRPTVAVNAWVAKLPADK
GQGDTRSLTVGTYRGNNYVYEFEVPASAWVASAREYQILKITVISGKTAAGYLSPAVSFD
AVELIGL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtctcgccgccctcacaacgttgcttctcgccccaactgctgtattcgcagct
tggggctggacagatgatgggaagaactatgttatcgatactaacgccaacttggttgtc
aaagtcagcaaatccaacgctgatatgacttcgatcaagtaccgcggcgtcgagtacaat
ggtcagaatggcaagaactcgcacgtggagtctggacttgcgcccggcactgtcaccatc
aagcaatacacctccccggccaacatcatcagagttaccatgaaagttgggactctcact
catacgctcgtcttccgctatggcaacccgaatgtgtacatttttatgaacaagagggat
acgagcatcactgtgtcacgttacattgtccgcatccctgcaaacatcttcacgaacaat
gtcaacgaggataccgactggattcccaacggtgcaccggctatcgaatctggtgatatc
aacggcgtcaacggtcaaacatggtcgaagcactattctggaaaaaagtatggtcgcact
atagactacgactatgtcggttacaccaacaataatgttggcatgtacctgatccgctca
aaccacgagaaagcgtctggaggtcctttcttcagaagtttaatccgtcgcggcggcgat
ggcggaccggatctctacgacatttaccagtacaacatgggccacaccgaccccatgcga
ctcggcctgcaaggcccatcagttctccacttcaccgacaacggcgcagcacccaaccac
aacctctttgcccgcaacgccaactgggactggttcgactcccttgaaatcgaagactgg
gtccctgccagccgccgcggcgccgttgccggcgttggcctcgccaacatgaagagcggc
ttccagtacgtcgttggcttgaaaaatgaccaagcccaatactggaccattgcaaccggc
gcatggcgcatcagcaacgccttgcctggcacttacaccttgaccgtctacaaaggcgaa
ctcgaagtccacaccagcaccgtaaccatctccccaggctccaccgcaacccgcaacaca
atcaccctcgtcgaccccaacgacacccccaccatctggcgcatcggcgactgggacggc
accccccggggcctcctcaacttccaagacacccccatgaaacccacctacatgcacccc
tccgactcccgtctcgcaaaatgggacgcaggcaacttcatcgtcggcacaacccccatc
tccggtttcccagcctacatctggaaagacattaacaacgaccatctcgtttatttccgc
cttaccgatgcccagcttgcacgcggagccaagatccgtatcggagttacgcagggtcag
gcgggcgggagaccgactgttgcggtgaatgcgtgggtggctaaattaccggctgataag
ggtcagggtgatacgaggagtctgacagtgggcacgtatagagggaataattatgtctat
gagtttgaggtcccggctagtgcgtgggtggcgagtgcgagggagtatcagattctcaag
attacggttatatcggggaagacggctgcggggtatttgagtccggcggtgagttttgat
gctgttgagttgattgggttgtaa
DBGET
integrated database retrieval system
