Bipolaris zeicola: COCCADRAFT_84792
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Entry
COCCADRAFT_84792 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
bze
Bipolaris zeicola
Pathway
bze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COCCADRAFT_84792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bze03400
]
COCCADRAFT_84792
DNA repair and recombination proteins [BR:
bze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
COCCADRAFT_84792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
RPN13_C
SWI2_SNF2
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
19151832
NCBI-ProteinID:
XP_007707969
JGI:
84792
UniProt:
W6Z213
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MKPFRPLTLSRPRPENGEPPSKKRRIGSNALSAGNRQPLNTMNNPAPAQFLPPGLEGNYY
TVLWRKHTTKKNKTWDGDGVLAVVGGYATLNDSETGKELGKGACSRPLLPGSTLSIGGRE
IEVENSMEKADYLSGRMFLGKAAAALIQQPKRPEPGHKSLSSVKPNSKKTQEIANDKESI
HEHRPSAHRKQQFKTPLLSTTVMPQRNPSIPQPRHDPNAPNALIMKRPDSCPKGKQIVDV
VVDPVLSKHLRDHQREGVQFLYECVMGMRCEGEGAIMADEMGLGKTLQTITLLWTLMKQN
PIHDSPPVIKKALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNKKIANFTMGKSYNI
MIVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSGTPLQ
NDLGEFYTAIDFVNPGLLGQRSAFKRSFELPIMRSRQPDASEAELEKGEARWKELVTLTS
QFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAETYRAILDSPTFRLALGSTDIALQLINV
LKKVCNSPSLLKSSKDNDDTPSEMLQSIIPLIPSKILNSSASSAKLRLLDSLVHSIYTTT
EEKIVIVSNYTTTLDMIERLLVSLSYTFLRLDGSTPASKRQALVEKFNKTPKTTSFAFLL
SAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLVQGGLDEKI
YQRQVMKMGLANAVVDNKASASSFSQEELRDLFRLDEREGCQTHDLLGCTCDCRGKLEGT
PDPENGESEEGVEEEEEYPMLRKASEVNIEEQEAKIKARRAAKQPKLRMLMEYRHIDTKV
LKGMDKSADEESAENDVGDDLAVAVDDDVFLNVLKQPECNVGFLLTKSTS
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttccggcctctcaccctctcgcgcccacgtcccgaaaatggcgagccaccg
agcaagaaacgaagaattggatccaatgcactgtcggcgggcaaccgccaaccgctcaac
actatgaacaatccagcaccagcacaattcctaccccctggtctcgaaggaaactattat
acggtattatggcgaaaacacacgaccaagaagaacaagacatgggacggggatggtgtt
cttgctgtcgtgggtggatatgccacgctcaacgacagcgagacagggaaagagctggga
aagggagcatgcagtcggccactacttcctggatccacactatccatcggtggaagagag
atagaagttgagaattctatggagaaggcggattacctttcgggacgtatgttcctaggc
aaggctgcagctgcactaatacagcagccaaagcggcctgagccaggacataagtctctg
tcatcagttaagccaaattcgaaaaagacccaagaaattgccaacgataaggagagcatt
cacgagcacaggccctcggctcatcgcaagcagcaattcaaaacaccattgctatctact
acggtcatgccgcagcgcaatccgtcaattccgcaaccccgtcacgacccaaatgcaccc
aacgccctcatcatgaaacgacctgattcctgtcccaaaggaaagcagatagttgatgta
gttgtcgatccggttctcagcaaacacctccgagaccaccagcgcgagggtgtacaattt
ttgtatgaatgcgtcatgggtatgcgatgcgagggcgagggtgccatcatggctgacgaa
atgggcttgggtaaaacgcttcagaccatcacacttctctggacactgatgaagcaaaat
ccgatacatgattctcctcctgttatcaagaaagccctaatcgtctgtcctgctggtcta
gtagataactggaaacgtgagttccgcaagtggctcggcaatgagagggtcggtgtattt
gtcttggatgcaaagaacaagaaaattgccaatttcaccatgggcaagtcttacaacatt
atgattgtgggatacgagatgcttcgtatcgttcaagaagagctgaagaagggcagtggt
gtcgacatcgtcattgcagacgagggtcataggttgaagacggcgaacaacaaggccatg
cttgctatccagtctctgaacaccgagaggcgtatcatcttgtccggtaccccactacag
aatgatcttggtgagttctatactgccatcgatttcgtcaaccctggactccttgggcaa
cgatccgccttcaagcgatcatttgaactgcccattatgcgtagtcgtcagccggacgca
agtgaagcagagctcgaaaaaggcgaggcacgctggaaggagcttgtaactctgactagt
cagttcatgatccggcggacagcagaagtcctttcaaaatacctaccaccgaaaactgag
cacattgtcttttgtcggccaaccaaaggacaagcggaaacttaccgtgctattctcgac
tcaccaacatttagacttgcgctgggtagtacggacattgcgctgcagctcatcaatgtt
ctaaagaaagtctgcaacagcccttcattactcaaatcgtccaaggacaatgatgacacg
ccatccgagatgctgcaatccatcatcccactcattcccagcaagatcctcaactcgagt
gcttcaagtgcaaaattgcgactactggacagcctcgtccactccatctacaccacgacc
gaggaaaaaattgttatagtctcaaactacacaacaacactagacatgatcgagcgcctg
ctcgtctctctctcctacaccttcctccgcctcgatggcagcacaccagcctccaagcgg
caggcccttgtcgaaaaattcaacaaaaccccaaaaacaacctctttcgctttcctcctc
tccgccaaatcaggcggcgtaggtctcaacctcatcggcgcctcacgcatcgtcctcttc
gacatcgactggaaccccgccaccgatctccaagccatggcgcgcattcaccgcgacggc
cagaaactgccatgtaaggtgtaccgctttctcgtgcaaggcggcctcgacgagaaaatc
taccagcgccaagtcatgaagatgggtctcgcgaacgcagttgtagataacaaagcctct
gcatcttctttttcgcaagaggaactccgcgacttgtttcgtctagatgagcgcgaaggg
tgccagactcacgatttactcggctgtacgtgcgactgtcggggcaagctcgaaggtaca
cctgaccctgagaatggagagtctgaggaaggagtggaagaagaagaggaatacccaatg
cttcggaaagccagcgaggttaatatcgaggagcaggaggcgaagattaaggccaggcgc
gcggcgaagcagcctaagttgaggatgttgatggagtatcggcatattgataccaaggtt
cttaagggtatggataagagtgccgacgaggaaagtgcagagaatgatgtgggggacgat
ctggcggttgcggtggatgatgatgtcttcctcaatgttttgaagcagccggagtgtaat
gtggggttcttgctgaccaagtcgacgtcataa
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