Bipolaris zeicola: COCCADRAFT_8851
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Entry
COCCADRAFT_8851 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_8851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_8851
Spliceosome [BR:
bze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
COCCADRAFT_8851
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
19152582
NCBI-ProteinID:
XP_007716851
JGI:
8851
UniProt:
W6XT96
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MSKPQFDRADASALLDDRGYRGALIRGQNPALLFEKGVRERITESYYWKEQCFGLNTATL
CDRAAELKFIGGTTGITGKPTPFLCLAFKMLQLVPEKEIILEYLNFRDDEDDEDDKAEVK
KENGDAAANDDDDSAKKELDLNAAGKLGCFKYLRCLAAFYIRLAWEPVEIYKTLEPLLTD
YRKIKRRLKDTFTLTHVDQFIDDLLTKDRICATSLWKLPSRAILEDLDMLDPRESPLGDE
VDELDEDMDRRSVGSEASYRSRSYDSRNRSRSRDRDSRSLSRSRSRSYDSRDRGRSRSRS
PGEQSIRSRLRLGTRSRSSSRNQRHSNDE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaccgcaatttgatcgcgccgacgcgagcgcgctcctcgacgaccgaggatac
cgcggcgccctcatccgtggccagaacccagcgctcctcttcgaaaagggtgtgcgcgag
cgcatcaccgagtcgtactattggaaggaacaatgcttcggtctgaacactgcaacacta
tgcgatcgcgccgcagaactcaagttcatcggtggcactacgggcatcacaggcaaaccg
acgccgttcctgtgcttggccttcaagatgctccagctggtcccggaaaaggaaatcatt
ctcgagtacctcaactttcgcgacgatgaggacgacgaagatgacaaagccgaggtcaag
aaagagaatggcgacgcggcagccaacgacgacgacgactctgccaagaaggagcttgac
ttgaatgcagcgggaaagctcggctgcttcaagtatctccgctgcctcgctgctttttac
attcgccttgcctgggaacctgtcgaaatctacaagacactagagcctctgctcacagac
tatcgcaagatcaagcgccgcctcaaagacacatttaccctcacccacgtcgaccagttc
attgacgatctcctcacaaaagaccgcatctgtgcgacgagcttgtggaagttgccttcg
agggcaattctcgaagatttggatatgctggacccaagagaaagtccgttgggagacgag
gtggacgagctagatgaggatatggataggaggagtgtcgggagtgaagcaagttatagg
agtcgaagctacgacagtcgaaataggagcagaagtagggaccgcgacagtcggagtctg
agccgcagtcgaagcagaagctacgatagtcgggatcgaggcaggagtcgtagtcgcagc
ccgggagagcaaagcatacgaagtcgattaagacttggcacacgaagccggagctccagt
cgtaaccaacgtcacagcaacgatgaatga
DBGET
integrated database retrieval system
